LOCUS AK303124 2421 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55436 complete cds, highly similar to
Tyrosine-protein phosphatase non-receptortype 22 (EC 3.1.3.48).
ACCESSION AK303124
VERSION AK303124.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2421)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2421
/clone="THYMU2011194"
/clone_lib="THYMU2"
/db_xref="H-InvDB:HIT000497748"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 504..2195
/codon_start=1
/note="highly similar to Tyrosine-protein phosphatase
non-receptortype 22 (EC 3.1.3.48)"
/protein_id="BAG64230.1"
/transl_table=1
/translation="MLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAVLE
LFKRQMDVIRDKHSGTESQAKHCIPEKNHTLQADSYSPNLPKSTTKAAKMMNQQRTKM
EIKESSSFDFRTSEISAKEELVLHPAKSSTSFDFLELNYSFDKNADTTMKWQTKAFPI
VGEPLQKHQSLGLGSLLFEGCSNSKPVNAAGRYFNSKVPITRTKSTPFELIQQRETKE
VDSKENFSYLESQPHDSCFVEMQAQKVMHVSSAELNYSLPYDSKHQIRNASNVKHHDS
SALGVYSYIPLVENPYFSSWPPSGTSSKMSLDLPEKQDGTVFPSSLLPTSSTSLFSYY
NSHDSLSLNSPTNISSLLNQESAVLATAPRIDDEIPPPLPVRTPESFIVVEEAGEFSP
NVPKSLSSAVKVKIGTSLEWGGTSEPKKFDDSVILRPSKSVKLRSPKSELHQDRSSPP
PPLPERTLESFFLADEDCMQAQSIETYSTSYPDTMENSTSSKQTLKTPGKSFTRSKSL
KILRNMKKSICNSCPPNKPAESVQSNNSSSFLNFGFANRFSKPKGPRNPPPTWNI"
BASE COUNT 793 a 500 c 441 g 687 t
ORIGIN
1 gctttttgga ggtgtctcgg ccatgacaca catttgacat gccctccctc aacctactta
61 tagactattt ttcttgctct gcagcatgga ccaaagagaa attctgcaga agttcctgga
121 tgaggcccaa agcaagaaaa ttactaaaga ggagtttgcc aatgaatttc tgaagctgaa
181 aaggcaatct accaagtaca aggcagacaa aacctatctt acaactgtgg ctgagaagcc
241 caagaatatc aagaaaaaca gatataagga tattttgccc tatgattata gccgggtaga
301 actatccctg ataacctctg atgaggattc cagctacatc aatgccaact tcattaaggg
361 agtttatgga cccaaggctt atattgccac ccagggtcct ttatctacaa ccctcctgga
421 cttctggagg atgatttggg aatatagtgt cctttgctgg ctgtggaagg actggtgtta
481 tttgtgctat tgattataca tggatgttgc taaaagatgg gataattcct gagaacttca
541 gtgttttcag tttgatccgg gaaatgcgga cacagaggcc ttcattagtt caaacgcagg
601 aacaatatga actggtctac aatgctgtat tagaactatt taagagacag atggatgtta
661 tcagagataa acattctgga acagagagtc aagcaaagca ttgtattcct gagaaaaatc
721 acactctcca agcagactct tattctccta atttaccaaa aagtaccaca aaagcagcaa
781 aaatgatgaa ccaacaaagg acaaaaatgg aaatcaaaga atcttcttcc tttgacttta
841 ggacttctga aataagtgca aaagaagagc tagttttgca ccctgctaaa tcaagcactt
901 cttttgactt tctggagcta aattacagtt ttgacaaaaa tgctgacaca accatgaaat
961 ggcagacaaa ggcatttcca atagttgggg agcctcttca gaagcatcaa agtttgggtt
1021 tgggctctct tttgtttgag ggatgttcta attctaaacc tgtaaatgca gcaggaagat
1081 attttaattc aaaggtgcca ataacacgga ccaaatcaac tccttttgaa ttgatacagc
1141 agagagaaac caaggaggtg gacagcaagg aaaacttttc ttatttggaa tctcaaccac
1201 atgattcttg ttttgtagag atgcaggctc aaaaagtaat gcatgtttct tcagcagaac
1261 tgaattattc actgccatat gactctaaac accaaatacg taatgcctct aatgtaaagc
1321 accatgactc tagtgctctt ggtgtatatt cttacatacc tttagtggaa aatccttatt
1381 tttcatcatg gcctccaagt ggtaccagtt ctaagatgtc tcttgattta cctgagaagc
1441 aagatggaac tgtttttcct tcttctctgt tgccaacatc ctctacatcc ctcttctctt
1501 attacaattc acatgattct ttatcactga attctccaac caatatttcc tcactattga
1561 accaggagtc agctgtacta gcaactgctc caaggataga tgatgaaatc ccccctccac
1621 ttcctgtacg gacacctgaa tcatttattg tggttgagga agctggagaa ttctcaccaa
1681 atgttcccaa atccttatcc tcagctgtga aggtaaaaat tggaacatca ctggaatggg
1741 gtggaacatc tgaaccaaag aaatttgatg actctgtgat acttagacca agcaagagtg
1801 taaaactccg aagtcctaaa tcagaactac atcaagatcg ttcttctccc ccacctcctc
1861 tcccagaaag aactctagag tccttctttc ttgccgatga agattgtatg caggcccaat
1921 ctatagaaac atattctact agctatcctg acaccatgga aaattcaaca tcttcaaaac
1981 agacactgaa gactcctgga aaaagtttca caaggagtaa gagtttgaaa attttgcgaa
2041 acatgaaaaa gagtatctgt aattcttgcc caccaaacaa gcctgcagaa tctgttcagt
2101 caaataactc cagctcattt ctgaattttg gttttgcaaa ccgtttttca aaacccaaag
2161 gaccaaggaa tccaccacca acttggaata tttaataaaa ctccagattt ataataatat
2221 gggctgcaag tacacctgca aataaaacta ctagaatact gctagttaaa ataagtgctc
2281 tatatgcata atatcaaata tgaagatatg ctaatgtgtt aatagctttt aaaagaaaag
2341 caaaatgcca ataagtgcca gttttgcatt ttcatatcat ttgcattgag ttgaaaactg
2401 caaataaaag tttgtcactt g
//