LOCUS AK303061 1610 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54571 complete cds, highly similar to Rab11
family-interacting protein 3.
ACCESSION AK303061
VERSION AK303061.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1610)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1610
/clone="TESTI4052273"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497685"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 186..1568
/codon_start=1
/note="highly similar to Rab11 family-interacting protein
3"
/protein_id="BAG64178.1"
/transl_table=1
/translation="MPFLKANEVTDSAYMGSESTYSECETFTDEDTSTLVHPELQPEG
DADSAGGSAVPSECLDAMEEPDHGALLLLPGRPHPHGQSVITVIGGEEHFEDYGEGSE
AELSPETLCNGQLGCSDPAFLTPSPTKRLSSKKVARYLHQSGALTMEALEDPSPELME
GPEEDIADKVVFLERRVLELEKDTAATGEQHSRLRQENLQLVHRANALEEQLKEQELR
ACEMVLEETRRQKELLCKMEREKSIEIENLQTRLQQLDEENSELRSCTPCLKANIERL
EEEKQKLLDEIESLTLRLSEEQENKRRMGDRLSHERHQFQRDKEATQELIEDLRKQLE
HLQLLKLEAEQRRGRSSSMGLQEYHSRARESELEQEVRRLKQDNRNLKEQNEELNGQI
ITLSIQGAKSLFSTAFSESLAAEISSVSRDELMEAIQKQEEINFRLQDYIDRIIVAIM
ETNPSILEVK"
BASE COUNT 396 a 442 c 538 g 234 t
ORIGIN
1 aaaaattaga gcgtgtctgg gagcaggtta aactttctcc taggtggtga tgtgcctcca
61 ggtgagcgca caggctttgt agaaacccca gcatgacaag caagtaggaa ggtgacattg
121 ttgtttgaga aaagccagtg acccggttgg gacggagaca cgatggggag ccggtctcca
181 acagcatgcc cttcctgaag gccaacgagg tgacggacag cgcgtacatg ggctccgaga
241 gcacctacag tgagtgtgag accttcacgg acgaggacac cagcaccctg gtgcaccctg
301 agctgcaacc tgaaggggac gcagacagtg ccggcggctc ggccgtgccc tctgagtgcc
361 tggacgccat ggaggagccc gaccatggtg ccctgctgct gctcccaggc aggcctcacc
421 cccatggcca gtctgtcatc acggtgatcg ggggcgagga gcactttgag gactacggtg
481 aaggcagtga ggcggagctg tccccagaga ccctatgcaa cgggcagctg ggctgcagtg
541 accccgcttt cctcacgccc agtccgacaa agcggctctc cagcaagaag gtggcaaggt
601 acctgcacca gtcaggggcc ctgaccatgg aggccctgga ggacccttcc cccgagctca
661 tggagggccc agaggaggac attgctgaca aggttgtctt cctggaaagg cgtgtgctgg
721 agctggaaaa ggacacggca gccaccggtg agcaacacag ccgcctgagg caggagaacc
781 tgcagctggt gcacagagca aacgccctgg aggagcagct gaaggagcag gagctgagag
841 cctgcgagat ggtcctggaa gagacccggc gtcagaagga gctcctgtgc aagatggaga
901 gggagaagag cattgagatc gagaacctgc agaccaggct acagcaactg gacgaggaga
961 acagtgaact ccggtcctgc acgccctgtc tgaaggccaa cattgagcgt ctggaggagg
1021 agaagcagaa gctgttggat gagatagagt cgctgacgct gcggctcagt gaagagcagg
1081 agaacaagag gagaatgggg gacaggctga gtcacgagag gcaccagttc cagagggaca
1141 aggaggccac ccaggagctg atcgaggacc tccgaaagca gctggagcac ctgcagctcc
1201 tcaagctgga ggccgagcag cggcggggcc gcagcagcag catgggcctg caggagtacc
1261 acagccgcgc ccgggagagc gagctggagc aggaggtccg caggctgaag caggacaacc
1321 gcaacctgaa ggagcagaac gaggagctga acgggcagat cattaccctc agcatccagg
1381 gcgccaagag cctcttctcc acagccttct ccgagtccct ggctgcagag atcagctccg
1441 tctcccgaga tgagctcatg gaggcgattc agaagcagga ggagatcaac ttccgcctgc
1501 aggactacat cgacaggatc atcgtggcca tcatggagac caacccgtcc atcctggagg
1561 tcaagtagag gcaggaaggt ccagcctgag ctggattcgg gactccaaca
//