LOCUS AK303038 1766 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54726 complete cds, highly similar to Zinc
finger protein 562.
ACCESSION AK303038
VERSION AK303038.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1766)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1766
/clone="TESTI4050747"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497662"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 226..1395
/codon_start=1
/note="highly similar to Zinc finger protein 562"
/protein_id="BAG64161.1"
/transl_table=1
/translation="MDSVTFDDVAVEFTPEEWALLDTTQKYLYRDVMLENYMNLASVD
FFFCLTSEWEIQPRTKRSSLQQGFLKNQIFTGIQMQTRSYSGWKLCENCGEVFSEQFC
LKTHMRAQNGGNTFEGNCYGKDSISVHKEASIGQELSKFNPCGKVFTLTPGLAVHLEI
LNGRQPYKCKECGKGFKYFASLDNHMGIHIGEKLCEFQECERAITTSSHLKQCVAVHT
GKKSEKTKNCGKSFTNFSQLSAHAKTHKGEKSFECKECGRSFRNSSSFNVHIQIHTGI
KPHKCTECGKAFTRSTHLTQHVRTHTGIKPYECKECGQAFTQYTGLAIHIRNHTGEKP
YQCKECGKAFNRSSTLTQHRRIHTGEKPYECVECGKTFITSSHRSKHLKTHSGER"
BASE COUNT 555 a 356 c 385 g 470 t
ORIGIN
1 atctttaccg gctgtggctc agcatggtca gtgccgttta acctttattg tggtggagtc
61 cacccctgct gtgggcctca gataaccctg tacaaagggg aatggagatt gcctgtatcc
121 acctagattc ataagctgcc ctgaggcgat cttggcatca agaaagacag cattgaggca
181 catctcacca tcagcttcag aggatgtcag cctttgatat gtcccatgga ttcagtgacg
241 tttgatgatg tggctgtgga gttcacccca gaggagtggg ctttactgga cacaactcag
301 aaatacctct acagagatgt gatgctggag aactacatga acctggcctc tgtggatttc
361 tttttctgct taacttcaga atgggaaata caacctagaa ccaaacggtc atcacttcag
421 cagggttttt tgaagaatca aatattcact gggatacaaa tgcagacaag aagctacagt
481 ggatggaaac tctgtgagaa ttgtggagag gtcttcagtg aacagttttg ccttaagaca
541 cacatgagag ctcagaatgg agggaacact tttgagggta attgttatgg aaaagacagc
601 atcagtgtgc acaaggaagc ctctattgga caagaacttt ccaaatttaa tccatgtgga
661 aaagtcttca ccttaactcc aggccttgct gtgcatcttg aaattctcaa tggaagacaa
721 ccctacaaat gtaaggaatg tggaaaaggc tttaagtatt ttgcaagcct tgataatcac
781 atgggaatcc acattggaga gaaactctgt gaatttcagg aatgtgagag agccatcaca
841 acttcctcac acttaaagca gtgtgtagca gttcatactg gaaagaaatc cgaaaagact
901 aagaactgtg ggaaatcctt cactaatttt tctcaacttt ctgcacatgc aaaaactcat
961 aaaggagaga agtcctttga atgtaaagaa tgtggaagat cctttagaaa ttcctcatcc
1021 tttaatgttc acattcaaat tcacactgga ataaaaccac acaaatgtac ggaatgtggg
1081 aaagccttca ctagatcaac tcaccttact caacatgtaa gaactcacac tggaataaaa
1141 ccctatgaat gtaaggaatg tggccaagcc ttcactcagt acacgggcct tgctatacac
1201 atacgaaatc acactggaga gaaaccctat cagtgtaagg aatgtgggaa agccttcaat
1261 agatcttcaa cgcttactca acatagaaga attcacacag gagagaagcc ttatgaatgt
1321 gttgaatgtg ggaagacctt cattacttct tcccatcgta gtaaacattt gaaaactcac
1381 agtggagaaa ggtaaatgca agatatgtgg gaaagaattt ctgtattcct caccccacct
1441 gtgaactcct accagagaga aaccttttgt atgtaaagaa tttgggaaag catttgctct
1501 ttcctcatgc ctaagtatgc atgaaagaat tcacactggg gagaaatact atgaatgtaa
1561 ggatatgagt gttgttacca tttagcccat tggttgccat ctttaattat tggcagtgca
1621 aagatcatca gattagtcct aaatgccttt tggaggttgt aatggctcac agattggcct
1681 tagatgcatc ccgagggtct gaaattaaac ctacaggttc tgaatacaac atcatggtta
1741 cctgagtctg ggcatctgtg aagaag
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