LOCUS AK302935 999 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59797 complete cds, highly similar to E3
ubiquitin ligase IBRDC2 (EC 6.3.2.-).
ACCESSION AK302935
VERSION AK302935.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 999)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..999
/clone="TESTI4042227"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497559"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 208..852
/codon_start=1
/note="highly similar to E3 ubiquitin ligase IBRDC2 (EC
6.3.2.-)"
/protein_id="BAG64094.1"
/transl_table=1
/translation="MLWITMPHPAHLGLFIAVTLSEVHLDPYRTWCPVADCQTVCPVA
SSDPGQPVLVECPSCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAEAPIK
QCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNLDNDIFLRHYDKGPCRNKLGHSRA
SVMWNRTQVVGILVGLGIIALVTSPLLLLASPCIICCVCKSCRGKKKKHDPSTT"
BASE COUNT 225 a 269 c 249 g 256 t
ORIGIN
1 gtaggtgagg ccgtcagcgc tggtgaagag ctgctgtggg atgagcccgt cctcaggcac
61 gtagccggtg cagcagttgc tcagatagtc cgccatgctg cgggagaccc cgcgacccca
121 cgtaaacacc cgcgcagccg ctgctgctgc tgctgttgtt actgttgccg ccatttttta
181 aatataaaat atagtctaat tcagggcatg ctgtggatca caatgcctca tcctgctcac
241 ttggggttat ttattgccgt cacactttct gaagttcatc tggaccccta ccgaacatgg
301 tgtcctgttg cagactgtca gacagtgtgc cctgttgcct cgagtgaccc aggacagcct
361 gtgctggtgg aatgcccttc ttgccacctg aaattctgct cgtgttgcaa ggatgcttgg
421 catgcagagg tctcctgtag agacagtcag cctattgtcc tgccaacaga gcaccgagcc
481 ctctttggga cagatgcaga agcccccatt aagcagtgcc cagtttgccg ggtttatatc
541 gaacgcaatg aaggctgcgc tcagatgatg tgcaaaaact gcaagcatac attttgctgg
601 tactgcctcc agaacttgga taatgacatt ttcctcagac attatgacaa agggccatgc
661 aggaataaac ttggccactc aagagcatca gtgatgtgga accgaacaca ggtggtgggg
721 attctcgtag gcttgggcat cattgccttg gttacttcac ccttgttact cctggcctcc
781 ccatgtataa tctgttgtgt ctgcaagtcc tgtcggggca agaagaaaaa gcacgaccca
841 tccacaacct aaagatctct gtgttcatac gccccagata tgtgagttac atgagatggc
901 acagtgataa agccccattt agtgaccttg cctccttctc cttgccaact ttgaaagtgc
961 ctccgtgtcc agactttgaa cttgcctgcc agccttcag
//