LOCUS AK302910 2107 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ53254 complete cds, highly similar to Nucleoporin NDC1. ACCESSION AK302910 VERSION AK302910.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2107) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2107 /clone="TESTI4040244" /clone_lib="TESTI4" /db_xref="H-InvDB:HIT000497534" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="testis" CDS 755..1774 /codon_start=1 /note="highly similar to Nucleoporin NDC1" /protein_id="BAG64078.1" /transl_table=1 /translation="MLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNGMTQK LILYQEAAATNGRVSSSYPVEPKKLNSPEETAFQTPKSSQMPRPSVPPLVKTSLFSSK LSTPDVVSPFGTPFGSSVMNRMAGIFDVNTCYGSPQSPQLIRRGPRLWTSASDQQMTE FSNPSPSTSISAEGKTMRQPSVIYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQA VFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHA SSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQF LEFKE" BASE COUNT 595 a 447 c 412 g 653 t ORIGIN 1 atctccatgg ccacggccgt gagccggccc tgcgccggca ggtcgcggga catactgtgg 61 cgcattcttt cagtgacctg tatagttcct atgtaatctt ttacttcctg ctgctgtcag 121 tggtaataat aataataagt attttcaatg tggagttcta tgcagttgtg ccttctattc 181 cttgctccag actagctctg atagggaaga tcattcatcc tcagcaactc atgcactcat 241 ttattcatgc tgcaatggga atggtgatgg cctggtgtgc tgcagtgata acccagggcc 301 agtacagctt tcttgtggtt ccctgcactg gtactaacag ctttggtagc cctgctgcgc 361 aaacctgctt aaatgaatat catctttttt tcctactgac tggagcattt atgggctata 421 gctatagcct cctgtatttt gttaacaaca tgaactatct tccatttccc atcatacagc 481 aatacaagtt cttgcgtttt aggagatctc tgctcttatt agttaaacac agttgtgtgg 541 aatcactgtt cctggttaga aatttctgca ttttatatta ttttcttggc tatattccca 601 aagcttggat tagcactgct atgaaccttc acatagatga gctcatgtgt ttcctgttca 661 accaccattt gcagaagggt cagatgagtg ccttccaaaa gtgttaaata gcaatcctcc 721 ccccatcata aagtatttag ccttgcagga cctgatgttg ctttctcaat attctccttc 781 acgaagacaa gaagttttca gcctcagcca accaggtgga catccccaca attggacagc 841 catttcaagg gagtgtttga atcttttaaa tggtatgact cagaaactga ttctctatca 901 agaagctgct gctacgaatg ggagagtgtc ttcatcttac ccagtggaac ctaagaaatt 961 aaattctcca gaagaaactg cttttcagac accaaaatct agccagatgc ctcggccttc 1021 agtgccacca ttagttaaaa catcactgtt ttcttcaaaa ttatctacac ctgatgttgt 1081 gagcccattt gggaccccat ttggctctag tgtaatgaat cggatggctg gaatttttga 1141 tgtaaacacc tgctatgggt caccgcaaag tcctcagcta ataagaaggg ggccaagatt 1201 gtggacatca gcttctgatc agcaaatgac tgaattttct aatccttctc catctacctc 1261 tattagtgct gagggtaaga caatgagaca acccagtgtg atttattcat ggattcagaa 1321 taaacgtgaa cagattaaga atttcttgtc aaaacgggtg ctgataatgt attttttcag 1381 taagcaccca gaggcctcca ttcaggctgt tttttcagat gcccaaatgc atatttgggc 1441 attagaaggt ctgtcgcact tagtagcagc atcatttaca gaggatagat ttggagttgt 1501 ccagacgaca ctaccagcta tccttaatac tttgttgaca ctgcaagagg cagtcgacaa 1561 gtactttaag cttcctcatg cttccagtaa accaccccgg atttcaggaa gccttgtgga 1621 cacttcatat aaaacattaa gatttgcatt cagagcatca ctgaaaactg ccatctatcg 1681 aataactact acatttggtg aacatctgaa tgctgtgcaa gcatctgcag aacatcagaa 1741 aagacttcaa cagttcttgg agttcaaaga atagttaagt aatataaact gtgttcatta 1801 cactgctgat acaactacag atgggacagt aaatgttcag cattcttgga tcagaagaaa 1861 acggactaat tagatgcttc ctttgtcgtg gtggttgctt tgaaaactat actttaatgg 1921 gagaaatcat ggaaagaaat tctcaacaga ataactgaaa actgcctttt ctgtaccgat 1981 tgctttttgt gtgtgtggta taataaaatc tttattcaat tttacagaag cattgatggc 2041 agtcaaaatg tctctagctc atataactta atagtaataa ctaaaaaact tttagaattt 2101 acttttg //