LOCUS AK302895 1774 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54206 complete cds, highly similar to
Ubiquilin-4.
ACCESSION AK302895
VERSION AK302895.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1774)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1774
/clone="TESTI4039184"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497519"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 14..1759
/codon_start=1
/note="highly similar to Ubiquilin-4"
/protein_id="BAG64068.1"
/transl_table=1
/translation="MAEPSGAETRPPIRVTVKTPKDKEEIVICDRASVKEFKEEISRR
FKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKAQDPAAATASSPSTP
DPASAPSTTPASPATPAQPSTSGSASSDAGSGSRRSSAGFGGILGLGSLGLGSANFME
LQQQMQRQLMSNPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHM
LNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSA
AREQFGNNPFSSLAGNSDSSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSG
TSQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRSMMQT
LAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALL
QIQQGLQTLQTEAPGLVPSLGSFGISRTPAPSAGSNAGSTPEAPTSSPATPATSSPTG
ASSAQQQLMQQMIQLLAGSGNSQVQTPEVRFQQQLEQLNSMGFINREANLQALIATGG
DINAAIERLLGSQLS"
BASE COUNT 392 a 592 c 478 g 312 t
ORIGIN
1 tggcggcggc ggcatggcgg agccgagcgg ggccgagacg aggcccccca ttcgggtcac
61 cgtcaagacc cccaaggaca aggaggaaat tgtgatctgc gatcgagcct cggtcaagga
121 gttcaaagag gaaatctccc ggaggtttaa ggctcagcag gatcagctgg tcctgatctt
181 cgcaggcaag atcctcaagg atggggacac actgaaccag cacggaatca aggacgggct
241 cactgtccat ctggtcatca agacccctca gaaggctcaa gatccagctg ctgccactgc
301 ttcttccccc tccacacctg accctgcctc agcaccctcc accacgcctg cttcacccgc
361 cacccctgcc cagccctcca cctctggcag tgcctcttca gatgctggca gtggaagccg
421 gaggagcagt gctggctttg ggggcatcct ggggctgggc agcctaggcc tgggctctgc
481 caacttcatg gagctgcagc agcagatgca gcggcagctg atgtccaatc ctgagatgct
541 gtcacagatc atggagaacc ccctggtcca ggatatgatg tctaaccctg atctgatgcg
601 tcacatgatt atggccaacc cccagatgca gcagttgatg gagcggaacc ctgagatcag
661 ccacatgctc aataaccctg aactcatgag gcagacaatg gagcttgctc ggaatccagc
721 catgatgcaa gagatgatgc ggaaccagga ccgggccctg agcaaccttg agagcatccc
781 tggagggtat aatgccctcc gccgcatgta cacggacatc caggagccca tgttcagtgc
841 tgcccgggaa cagtttggca acaatccctt ctcttccctg gccgggaact ccgacagctc
901 atcctcccag cctctgcgga ctgagaatcg agagcccctc cctaacccct ggagcccctc
961 gccccccacc tcccaggccc ccgggtccgg tggggagggc accggaggat cggggaccag
1021 ccaggtgcac ccgacagtct cgaacccctt tgggatcaat gcggctagcc tggggtcagg
1081 gatgttcaat agcccagaaa tgcaagccct cctccagcag atctctgaga acccccagct
1141 gatgcagaat gtgatctcag caccctacat gcgcagcatg atgcagacgc ttgcccagaa
1201 ccccgacttt gctgctcaga tgatggtgaa tgtgccgctc ttcgcgggga acccccaact
1261 gcaggagcag ctccgcctgc agctcccagt cttcctgcag cagatgcaga acccagagtc
1321 actctccatc cttaccaatc cccgagccat gcaggcattg ctgcagatcc agcagggact
1381 acagaccttg cagaccgagg cccctgggct ggtacccagc cttggctcct ttgggatatc
1441 ccggacccca gcaccctcag caggcagcaa cgcagggtct acgcccgagg cccccacttc
1501 ctcaccagcc acgccagcca catcttctcc aacaggggct tccagcgccc agcagcaact
1561 catgcagcag atgatccagc ttttggctgg aagtggaaac tcacaggtgc agacgccaga
1621 agtgagattt cagcagcagc tggagcagct caactccatg ggcttcatca atcgtgaggc
1681 taacctgcag gccctgattg ccacaggagg ggacatcaac gcagctatcg agagactgct
1741 gggctcccag ctctcctaat ccctcggccc atgc
//