LOCUS AK302846 3321 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55645 complete cds, highly similar to 5'-3'
exoribonuclease 2 (EC 3.1.11.-).
ACCESSION AK302846
VERSION AK302846.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3321)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3321
/clone="TESTI4034842"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497470"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 142..2832
/codon_start=1
/note="highly similar to 5'-3' exoribonuclease 2 (EC
3.1.11.-)"
/protein_id="BAG64035.1"
/transl_table=1
/translation="MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLL
YMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFD
SNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRR
QRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHE
VKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVER
SIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQR
VQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSR
NSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPLGGIKRKAEDSDSEPE
PEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKW
YYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSD
PDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNS
LGGDVLFVGKHHPLHDFILELYQTGSTEPVEVPPELCHGIQGKFSLDEEAILPDQIVC
SPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKPSDWEKSSNGRQ
WKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGIYSNAAPPPVTYQGNLYRPLLRG
QAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQNAAFQPNQYQ
MLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYNWN"
BASE COUNT 1018 a 636 c 756 g 911 t
ORIGIN
1 gcattttggg tctcggaaga ggttcagagg ctgttgttga gcaatgcatg ccagccaaaa
61 gaatgcaatg gtgtaaagat tccagttgat gccagtaaac ctaatccaaa tgatgtggag
121 tttgataatc tgtatttgga tatgaatgga atcatccatc cctgtactca tcctgaagac
181 aaaccagcac caaaaaatga agatgaaatg atggttgcaa tttttgagta cattgacaga
241 cttttcagta ttgtaagacc aagaagactt ctctacatgg caatagatgg agtggcacca
301 cgtgctaaaa tgaaccagca gcgttcaagg aggttcaggg catcaaaaga aggaatggaa
361 gcagcagtcg agaagcagcg agtcagggaa gaaatattgg caaaaggtgg ctttcttcct
421 ccagaagaaa taaaagaaag atttgacagc aactgtatta caccaggaac tgaattcatg
481 gacaatcttg ctaaatgcct tcgctattac atagctgatc gtttaaataa tgaccctggg
541 tggaaaaatt tgacagttat tttatctgat gctagtgctc ctggtgaagg agaacataaa
601 atcatggatt acattagaag gcaaagagcc cagcctaacc atgacccaaa tactcatcat
661 tgtttatgtg gagcagatgc tgatctcatt atgcttggcc ttgccacaca tgaaccgaac
721 tttaccatta ttagagaaga attcaaacca aacaagccca aaccatgtgg tctttgtaat
781 cagtttggac atgaggtcaa agattgtgaa ggtttgccaa gagaaaagaa gggaaagcat
841 gatgaacttg ccgatagtct tccttgtgca gaaggagagt ttatcttcct tcggcttaat
901 gttcttcgtg agtatttgga aagagaactc acaatggcca gcctaccatt cacatttgat
961 gttgagagga gcattgatga ctgggttttc atgtgcttct ttgtgggaaa tgacttcctc
1021 cctcatttgc catcgttaga gattagggaa aatgcaattg accgtttggt taacatatac
1081 aaaaatgtgg tacacaaaac tgggggttac cttacagaaa gtggttatgt caatctgcaa
1141 agagtacaga tgatcatgtt agcagttggt gaagttgagg atagcatttt taaaaagaga
1201 aaggatgatg aggacagttt tagaagacga cagaaagaaa aaagaaagag aatgaagaga
1261 gatcaaccag ctttcactcc tagtggaata ttaactcctc atgccttggg ttcaagaaat
1321 tcaccaggtt ctcaagtagc cagtaatccg agacaagcag cctatgaaat gaggatgcag
1381 aataactcta gtccttcgat atctcctaat acgagtttca catctgatgg ctccccgtct
1441 ccattaggag gaattaagcg aaaagcagaa gacagtgaca gtgaacctga gccagaggat
1501 aatgtcaggt tatgggaagc tggctggaag cagcggtact acaagaacaa atttgatgtg
1561 gatgcagctg atgagaaatt ccgtcggaaa gttgtgcagt cgtacgttga aggactttgc
1621 tgggttctta gatattatta ccagggctgt gcttcctgga agtggtatta tccatttcat
1681 tatgcaccat ttgcttcaga ctttgaaggc attgcagaca tgccatctga ttttgagaag
1741 ggtacgaaac cgtttaaacc actagaacaa cttatggggg tatttccagc tgcaagtggt
1801 aattttctac ctccatcatg gcggaagctc atgagtgatc ctgattctag tataattgac
1861 ttctatcctg aagattttgc tattgatttg aatgggaaga aatatgcatg gcaaggtgtt
1921 gctctcttgc cattcgtgga tgagcgaagg ctacgagctg ccctagaaga ggtataccca
1981 gacctcactc cagaagagac cagaagaaac agccttggag gtgatgtctt atttgtgggg
2041 aaacatcacc cactccatga cttcatttta gagctgtacc agacaggttc cacagagcca
2101 gtggaggtac cccctgaact atgtcatggg attcaaggaa agttttcttt ggatgaagaa
2161 gccattcttc cagatcaaat agtatgttct cctgttccta tgttaaggga tctgacacag
2221 aacactgtag tcagtattaa ttttaaagac ccacagtttg ctgaagatta catttttaaa
2281 gctgtaatgc ttccaggagc aagaaagcca gcagcagtac tgaaacctag tgactgggaa
2341 aaatccagca atggacggca gtggaagcct cagcttggct ttaaccgtga ccggaggcct
2401 gtgcacctgg atcaggcagc cttcaggact ttgggccatg tgatgccaag aggctcagga
2461 actggcattt acagcaatgc tgcaccacca cctgtgactt accagggaaa cttatacagg
2521 ccgcttttga gaggacaagc ccagattcca aaacttatgt caaatatgag gccccaggat
2581 tcctggcgag gtcctcctcc ccttttccag cagcaaaggt ttgacagagg cgttggggct
2641 gaacctctgc tcccatggaa ccggatgctg caaacccaga atgcagcctt ccagccaaac
2701 cagtaccaga tgctagctgg gcctggtggg tatccaccca gacgagatga tcgtggaggg
2761 agacagggat atcccagaga aggaaggaaa taccctttgc caccaccctc aggaagatac
2821 aattggaatt aagcttttgt aaagctttcc caaatccttt catcattcta cagttttatg
2881 ctatttgtgg aaagatttct ttctcaagta gtagttttta ataaaactac agtactttgt
2941 gtatttcttt taactgtgta tatttctact gatctgatct cactgtttat gttgctttcc
3001 aaagatgtat gttgcataat acagtggatc tgaatttatt attgcttata aaacacattt
3061 gatggaatag gagtactggt ttttcataat ggttaaaaat gaaaccagct gtggatttca
3121 aaacacagtg tattctagat catctaagat ccatgctgat ttttattgca caagaattag
3181 gtttgaactc ttgagctgga acctcagcaa actagagtat atattgttca gtatttcttt
3241 ggaaacattt cattaatgta cttgtcttac agaaatttct gaactttagt aaaaaaaaat
3301 aaagttaaac ttttaaaact c
//