LOCUS AK302812 3506 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54099 complete cds, highly similar to
Importin beta-3.
ACCESSION AK302812
VERSION AK302812.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3506)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3506
/clone="TESTI4031835"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497436"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 187..3300
/codon_start=1
/note="highly similar to Importin beta-3"
/protein_id="BAG64012.1"
/transl_table=1
/translation="MAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSS
MRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFDSVSSQNVGLREAALHIFWNFPGIF
GNQQQHYLDVIKRMLVQCMQDQEHPSIRTLSARATAAFILANEHNVALFKHFADLLPG
FLQAVNDSCYQNDDSVLKSLVEIADTVPKYLRPHLEATLQLSLKLCGDTSLNNMQRQL
ALEVIVTLSETAAAMLRKHTNIVAQTIPQMLAMMVDLEEDEDWANADELEDDDFDSNA
VAGESALDRMACGLGGKLVLPMIKEHIMQMLQNPDWKYRHAGLMALSAIGEGCHQQME
GILNEIVNFVLLFLQDPHPRVRYAACNAVGQMATDFAPGFQKKFHEKVIAALLQTMED
QGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKLVLE
QVVTSIASVADTAEEKFVPYYDLFMPSLKHIVENAVQKELRLLRGKTIECISLIGLAV
GKEKFMQDASDVMQLLLKTQTDFNDMEDDDPQISYMISAWARMCKILGKEFQQYLPVV
MGPLMKTASIKPEVALLDTQDMENMSDDDGWEFVNLGDQQSFGIKTAGLEEKSTACQM
LVCYAKELKEGFVEYTEQVVKLMVPLLKFYFHDGVRVAAAESMPLLLECARVRGPEYL
TQMWHFMCDALIKAIGTEPDSDVLSEIMHSFAKCIEVMGDGCLNNEHFEELGGILKAK
LEEHFKNQELRQVKRQDEDYDEQVEESLQDEDDNDVYILTKVSDILHSIFSSYKEKVL
PWFEQLLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCD
NSPEVRQAAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCIS
AVGKIMKFKPDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNN
TNLPKIFSIIAEGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAI
QELLNSA"
BASE COUNT 1028 a 737 c 803 g 938 t
ORIGIN
1 tttttccggc cattgctgcc gcggcgcctg gcaccagtta cctccccgcc gccgctcgca
61 cccacgtgcg gccgctcccg acgcgccccc gtccaggaaa cctatgagaa tatcccaggc
121 cagtcaaaga tcacattcct cttacaagcc atcagaaata caacagctgc tgaagaggct
181 agacaaatgg ccgccgttct cctaagacgt ctcttgtcct ctgcatttga tgaagtctat
241 ccagcacttc cctctgatgt tcagactgcc atcaagagtg agctactcat gattattcag
301 atggaaacac aatctagcat gaggaaaaaa gtttgtgata ttgcggcaga actggccagg
361 aatttaatag atgaggatgg caataaccag tggcccgaag gtttgaagtt cctttttgat
421 tcagtcagct ctcaaaatgt gggactgcgg gaagctgccc ttcacatttt ctggaacttt
481 cctggaattt ttgggaacca gcaacaacac tatttagatg tcatcaaacg aatgttagtt
541 cagtgtatgc aagatcagga acacccgtcg atcaggacgt tatctgctag agctacagct
601 gcatttatac ttgcaaatga gcataatgtt gctctgttca aacattttgc agacttgcta
661 ccgggattcc tacaggcggt aaatgactcg tgctaccaga atgatgattc tgtcctaaaa
721 tccctcgttg agattgcaga tactgttcca aagtatttgc gtcctcactt ggaagcaact
781 ctacagctaa gtctaaagtt gtgtggagac actagcctca acaatatgca acgccagctt
841 gcccttgaag tgatcgtcac cctctctgag actgcagctg ctatgttaag aaaacatacc
901 aatattgttg cacagactat tcctcagatg ttagcaatga tggttgattt ggaagaagat
961 gaggactggg caaatgcaga tgaactagaa gatgatgatt ttgacagcaa tgcagttgca
1021 ggcgagagtg ctctagatcg aatggcttgc ggacttggtg gaaagctcgt tctgccgatg
1081 atcaaggaac acattatgca aatgcttcaa aatcctgact ggaaataccg gcatgcagga
1141 ttgatggcct tatctgccat tggtgaaggg tgccaccagc aaatggaagg aattctaaat
1201 gagatcgtaa attttgtttt actttttctc caggatcctc atccaagagt aaggtatgca
1261 gcctgtaatg ccgtgggaca gatggctaca gattttgcac ctggtttcca aaagaaattt
1321 catgagaagg tgattgcagc tctgctgcag accatggaag accaaggcaa tcaacgtgtg
1381 caggcccatg cagctgctgc cctcattaac tttactgaag actgtcccaa gtcactactt
1441 attccatact tggataattt ggtgaaacat ctgcattcca ttatggtact gaagcttcaa
1501 gagctgattc agaaaggcac caagttagtt ttggaacaag ttgtgacatc cattgcatca
1561 gttgccgata ctgcagaaga aaaatttgtc ccctactatg atttatttat gccatcactg
1621 aagcacatcg ttgagaatgc ggttcaaaaa gaactgagac ttctgagagg aaaaactatt
1681 gaatgcatta gcctcattgg tctggctgtt gggaaggaaa aattcatgca ggatgcatca
1741 gatgtgatgc agcttttgtt aaagacccag acagacttca atgatatgga agatgatgat
1801 cctcagatct cttacatgat ctcagcatgg gccagaatgt gcaaaatcct tggaaaagaa
1861 tttcagcaat accttccagt ggttatgggg cctttaatga agacggcttc aattaagccc
1921 gaagtagccc ttttagatac ccaagacatg gagaatatga gtgatgatga tggttgggaa
1981 tttgtgaacc ttggagatca gcaaagcttt ggtattaaaa ctgcaggact agaagaaaaa
2041 tcaactgctt gccagatgtt ggtttgctat gctaaggagt taaaggaagg ctttgtggag
2101 tataccgaac aggttgtcaa actgatggtc cctttactga aattttattt ccacgatggt
2161 gttcgagtgg cagcagcgga atccatgcct cttctcctgg agtgtgcaag agtccgtggt
2221 cctgagtatc tcacacagat gtggcatttt atgtgtgatg ctctaattaa ggccattggc
2281 acagaaccag attcagacgt cctctcagaa ataatgcatt cttttgcaaa gtgcattgaa
2341 gtaatgggag atggatgcct taataatgaa cactttgaag aactgggagg tatattgaaa
2401 gcaaagcttg aagaacattt taaaaatcaa gaattacgac aagttaaaag acaagatgaa
2461 gactatgatg aacaggtcga agagtcacta caagatgagg atgataatga tgtttatatt
2521 ctgaccaaag tgtcagatat tttacactca atattcagta gctacaaaga aaaggtgtta
2581 ccatggtttg aacagctgct tccattaatt gtcaacctca tttgtccaca tagaccatgg
2641 ccagacagac aatggggatt atgcatcttt gatgatgtca tagaacactg tagtccagcc
2701 tcatttaaat acgcagaata tttcttaaga ccaatgctcc aatatgtatg tgacaacagc
2761 ccagaagtca ggcaagcagc tgcatatggc ctgggagtca tggcacagta cggtggagat
2821 aattatcgcc ctttttgtac agaagcactt cccctgctgg taagagttat tcagtctgcg
2881 gattctaaga ccaaagaaaa tgtcaatgct acagagaact gcatctcagc agtagggaaa
2941 atcatgaagt tcaagcctga ctgtgtaaac gttgaagagg tccttccaca ctggttgtct
3001 tggcttccac tacatgaaga taaagaagaa gctgttcaga ctttcaatta tctgtgtgac
3061 ctgattgaaa gtaatcatcc aattgttctt ggcccaaaca ataccaatct gcccaaaata
3121 tttagtataa ttgcggaagg agaaatgcac gaggcaatta aacatgaaga tccttgtgcc
3181 aaacgtctgg ccaatgtcgt tcgccaagta cagacttctg gaggactgtg gactgagtgc
3241 atagcacagc tcagtcctga gcagcaggcc gccattcagg agctcctgaa ctctgcgtga
3301 agggccttaa tgtcacccac cagaaaacta actccaaata aacgcttacc ctttccttta
3361 ggtttctttg ttttgttttt gagcaaaaga gatcggtagt gttgtgtgta ggccattctt
3421 ctggagagcc acaagcagga agagcagcgc tgtgttgcag aatggagttt ccatggattt
3481 ctaccagacc actgaaggag ttcctg
//