LOCUS AK302790 3525 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53419 complete cds, highly similar to Solute
carrier family 12 member 4.
ACCESSION AK302790
VERSION AK302790.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3525)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3525
/clone="TESTI4030661"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497414"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 39..3278
/codon_start=1
/note="highly similar to Solute carrier family 12 member
4"
/protein_id="BAG63994.1"
/transl_table=1
/translation="MAAEGAVCGFVYLEGTAWAVPEDTEPLASCTLGHGNHRESSPFL
SPLEASRGIDYYDRNLALFEEELDIRPKVSSLLGKLVSYTNLTQGAKEHEEAESGEGT
RRRAAEAPSMGTLMGVYLPCLQNIFGVILFLRLTWMVGTAGVLQALLIVLICCCCTLL
TAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTLAAAMYILGAIEIL
LTYIAPPAAIFYPSGAHDTSNATLNNMRVYGTIFLTFMTLVVFVGVKYVNKFASLFLA
CVIISNLSIYAGGIKSIFDPPVFPVCMLGNRTLSRDQFDICAKTAVVDNETVATQLWS
FFCHSPNLTTDSCDPYFMLNNVTEIPGIPGAAAGVLQENLWSAYLEKGDIVEKHGLPS
ADAPSLKESLPLYVVADIATSFTVLVGIFFPSVTGIMAGSNRSGDLRDAQKSIPVGTI
LAIITTSLVYFSSVVLFGACIEGVVLRDKYGDGVSRNLVVGTLAWPSPWVIVIGSFFS
TCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHGKVNGEPTWALLLTALIAELGILIA
SLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSLCLALM
FVSSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTK
NWRPQLLVPLKLDEDLHVKYPRLLTFASQLKAGKGLTIVGSVIQGSFLESYGEAQAAE
QTIKNMMEIEKVKGFCQVVVASKVREGLAHLIQSCGLGGMRHNSVVLGWPYGWRQSED
PRAWKTFIDTVRCTTAAHLALLVPKNIAFYPSNHERYLEGHIDVWWIVHDGGMLMLLP
FLLRQHKVWRKCRMRIFTVAQMDDNSIQMKKDLAVFLYHLRLEAEVEVVEMHNSDISA
YTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSALRLESLYSDEEDESAVGAD
KIQMTWTRDKYMTETWDPSHAPDNFRELVHIKPDQSNVRRMHTAVKLNEVIVTRSHDA
RLVLLNMPGPPRNSEGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS"
BASE COUNT 669 a 1045 c 1040 g 771 t
ORIGIN
1 agtgcatggt ggggtagcca gccggccacc tttgggccat ggcagccgaa ggtgctgtgt
61 gcggcttcgt ctatctggag ggcactgcct gggcggtccc tgaggacacc gaacccttgg
121 catcctgcac attgggacat ggcaaccaca gagagagcag cccttttctt tcccccttgg
181 aggcttccag aggaattgac tactatgaca ggaacctggc actgtttgag gaagagctgg
241 acatccgccc aaaggtatcg tctcttctgg gaaagctcgt cagctacacc aacctcaccc
301 agggcgccaa agagcatgag gaggccgaga gtggggaggg cacccgccgg agggcagccg
361 aggcacccag catgggcacc ctcatggggg tgtacctgcc ctgcctgcag aatatctttg
421 gggttatcct cttcctgcgg ctgacctgga tggtgggcac agcaggtgtg ctacaggccc
481 tcctcatcgt gcttatctgc tgctgttgta ccctgctgac ggccatctcc atgagtgcca
541 tcgccaccaa cggtgtggtt ccagctgggg gctcctattt catgatctct cgttcactgg
601 ggccagaatt tggaggtgct gtgggcctgt gcttctacct gggaacaaca ctcgcagcag
661 ccatgtacat cctgggggcc atcgagatct tgctgaccta cattgcccca ccagctgcca
721 ttttttaccc atcgggtgct catgacacgt cgaatgccac tttgaacaat atgcgtgtgt
781 atgggaccat tttcctgacc ttcatgaccc tggtggtgtt tgtgggggtc aagtatgtga
841 acaaatttgc ctcgctcttc ctggcctgtg tgatcatctc caacctctcc atctatgctg
901 ggggcataaa gtctatattt gaccctcccg tgtttccggt atgcatgctg ggcaacagga
961 ccctgtcccg ggaccagttt gacatctgtg ccaagacagc tgtagtggac aatgagacag
1021 tggccaccca gctatggagt ttcttctgcc acagccccaa ccttacgacc gactcctgtg
1081 acccctactt catgctcaac aatgtgaccg agatccctgg catccccggg gcagctgctg
1141 gtgtgctcca ggaaaacctg tggagcgcct acctggagaa gggtgacatc gtggagaagc
1201 atgggctgcc ctccgcagat gccccgagcc tgaaggagag cctgcctctg tacgtggtcg
1261 ctgacatcgc cacatccttc accgtgctgg tcggcatctt cttcccttct gtaacaggca
1321 tcatggctgg ctcaaaccgc tctggggacc ttcgtgacgc ccagaagtct atccctgtgg
1381 ggaccattct ggccatcatt acaacttccc tcgtgtactt cagcagtgtg gttctctttg
1441 gtgcctgcat tgagggtgtg gttctccggg acaagtatgg cgatggtgtc agcaggaact
1501 tggtggtggg cacactggcc tggccttcac cctgggtcat cgtcatcggc tccttctttt
1561 caacgtgtgg cgctggcctc cagagcctca caggggcacc acgcctattg caggccattg
1621 ccaaggacaa catcatcccc ttcctccggg tgtttggcca cgggaaggtg aatggtgaac
1681 ccacatgggc actcctcctg acggcactca tcgccgagct gggcatcctc atcgcctccc
1741 tcgacatggt ggcccccatc ttatccatgt tctttctgat gtgctacctg ttcgtgaacc
1801 tcgcctgtgc ggtgcagaca ctcctgagga cccccaactg gcggccccgg ttcaagtact
1861 atcactgggc gctgtccttc ctgggcatga gtctctgcct ggcccttatg tttgtctcct
1921 cctggtacta tgccctggtg gccatgctca tcgccggcat gatctacaaa tacatcgagt
1981 accaaggggc tgagaaggag tggggtgacg ggatccgagg cctgtccctg agcgctgccc
2041 gctacgcgct gttgcggctg gaggaggggc ctcctcacac caagaactgg cggccgcagc
2101 tgctggtgcc gctgaagctg gacgaggacc tccacgtgaa gtacccgcgg ctcctcacct
2161 tcgcctccca gctcaaggct ggcaagggcc tgaccattgt tggttctgtc atccagggga
2221 gcttcttgga gagctatggc gaggctcagg ccgccgagca gaccatcaag aacatgatgg
2281 aaattgagaa ggtgaagggc ttctgccagg tggtggtggc cagcaaggtg cgggaggggc
2341 tggcccacct catccagtcc tgtggcctgg gaggcatgcg gcataactcc gtggtgctgg
2401 gctggcccta cggctggcga cagagcgagg acccccgtgc ctggaagacc ttcattgaca
2461 ccgtgcgctg cactacggct gcccacctgg ccctgctcgt gcccaagaac atcgccttct
2521 accccagcaa ccacgagcgc tacctggagg gccacataga cgtgtggtgg atcgtgcacg
2581 atggtggcat gctcatgctt ctgcccttcc tgctgcgcca gcataaggtc tggaggaagt
2641 gccggatgcg catcttcaca gtggcccaga tggatgacaa cagcatccag atgaagaagg
2701 acctggctgt ctttctgtac catctgcgcc ttgaggccga ggtggaggtg gtggagatgc
2761 ataacagtga catctctgca tacacctacg agcggacgct gatgatggag cagcggtcgc
2821 agatgctgcg gcagatgaga ctgaccaaga ctgagcggga gcgagaagcc cagctggtca
2881 aggatcggca ctcggccctg cggctggaga gcctgtactc ggacgaggaa gatgagtctg
2941 cagtgggggc tgacaagatc cagatgacgt ggaccaggga caagtacatg actgagacct
3001 gggaccccag ccatgcccct gacaatttcc gggagctggt gcacattaag ccggaccaat
3061 ccaatgtgcg gcgcatgcac actgctgtga agctcaatga agtcattgtc acgcgctccc
3121 acgacgcccg cctggttctc ctaaacatgc ctggcccacc caggaacagt gagggcgacg
3181 agaactacat ggagttcctc gaggtgctga ccgagggcct tgagcgggtg ctgttggtgc
3241 gcggtggtgg ccgtgaagtc atcaccatct actcctgagc ccagtgtcat cttgtggcct
3301 ggagtcgagg tcttggccag gacataacaa gctgtggtct ggggtaacag cctcttccca
3361 gcacccacct gccagccctg cttgcctggc cctgccctgg acccagcttt gctaggtctc
3421 cttggaaacc aggcctgggc ctcaaaatgg agatggatcc caggtcttgt gggaccctgg
3481 gatgtttggg gactttacta tctagcaccc cagtaggcct gtcct
//