LOCUS AK302773 3004 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58739 complete cds, highly similar to Nuclear
pore complex protein Nup107.
ACCESSION AK302773
VERSION AK302773.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3004)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3004
/clone="TESTI4028893"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497397"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 245..2935
/codon_start=1
/note="highly similar to Nuclear pore complex protein
Nup107"
/protein_id="BAG63979.1"
/transl_table=1
/translation="MKILVILHQETRLSLELLAHFDSLVLSTNLLFIVTPTSRSLLRQ
PDISCILGTGGKSPRLTQSSGFFGNLSMVTNLDDSNWAAAFSSQRSGLFTNTEPHSIT
EDVTISAVMLREDDPGEAASMSMFSDFLQSFLKHSSSTVFDLVEEYENICGSQVNILS
KIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSALEEESVFAVTAVNA
SEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGEFSDNIEFYAKSVYWENTLHTLK
QRQLTSYVGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTEEAQ
RLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGNPYRRIWKISCWRMAEDELFN
RYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIQTSVATLDETEELP
REYLGANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSK
SRNNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLIREKHTNLIAFYTCH
LPQDLAVAQYALFLESVTEFEQRHHCLELAKEADLDVATITKTVVENIRKKDNGEFSH
HDLAPALDTGTTEEDRLKIDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEV
FVKIPQDSIAEIYNQCEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNS
VPQKPALIPQPTFTEKVAHEHKEKKYEMDFGIWKGHLDALTADVKEKMYNVLLFVDGG
WMVDVREDAKEDHERTHQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSER
HKLYLVFSKEELRKLLQKLRESSLMLLDQGLDPLGYEIQL"
BASE COUNT 933 a 548 c 688 g 835 t
ORIGIN
1 aagtgccagc atcagattct gagttccctc tatgatctgg gtactgtgct agccgcctac
61 aacaaagatc agttattcaa gatccttccc ctcggggaat tagttgtgta atggagacaa
121 ccaagcagtg taaagtggag tggctttgga gagatatcat cccctgtaat ccgggaggca
181 gaggtgacac ggactgcacg aaaacagagt gctcagaaaa gagttttact tcaggcatct
241 caagatgaaa attttggtaa tactacacca agaaaccagg ttatccctcg aactcctagc
301 tcatttcgac agccttgttc tttctaccaa ccttttgttt atagttaccc caacaagccg
361 aagcttacta aggcagccag atatttcctg cattcttgga acaggaggga agtcgccccg
421 acttacgcag tcttcagggt tctttggaaa tctctccatg gttactaatc tggatgacag
481 taactgggca gctgcatttt catcacagcg ttccgggctg ttcacaaaca cagagcccca
541 cagtataaca gaagatgtaa ctatcagtgc tgttatgtta cgtgaggatg atcctggaga
601 agctgcatcc atgagtatgt tttctgattt cctgcagtct tttctgaagc actcttcgag
661 tacagttttt gatcttgtgg aagagtatga aaacatctgt ggtagtcagg tgaatatact
721 gagtaaaata gtgagtcgag caacacctgg acttcaaaaa ttttcaaaaa cagccagtat
781 gctctggctt cttcaacagg agatggtcac atggaggctg ctggcttctt tgtatagaga
841 cagaatacag tctgcattag aagaggaaag tgtattcgca gttactgctg ttaatgccag
901 tgaaaaaaca gttgtggaag cgttatttca gagggattca cttgttcgac aaagtcagct
961 ggtggtagat tggttagaga gtattgccaa agatgaaatt ggagaatttt ctgataatat
1021 tgagttttat gcaaaatcag tatattggga aaatactctg cataccttaa aacaacggca
1081 gctgacttct tacgttggaa gtgttcgtcc gcttgtcact gaattggacc ctgatgctcc
1141 cataagacag aaaatgcccc ttgatgatct ggatagagaa gatgaagtta gattactcaa
1201 atatctcttt actctaatcc gtgctggaat gacagaagag gcacaacgac tctgtaaacg
1261 ctgtggtcaa gcatggagag ctgcaacact tgaaggctgg aaactgtacc atgaccctaa
1321 tgttaatgga ggaacagaat tagaacctgt tgaagggaat ccatatagac gcatttggaa
1381 aataagttgc tggagaatgg cagaagatga gctttttaat agatacgaga gagcaattta
1441 tgcagcttta agtgggaatc ttaagcagct gcttcctgtc tgtgacacct gggaagacac
1501 agtttgggcc tacttccggg tgatggtgga cagtctggta gaacaagaga tccagacatc
1561 agtagcaact ctggatgaaa ctgaagaact ccctagagaa tatctgggag caaactggac
1621 gttagaaaag gtttttgagg aacttcaagc tactgacaaa aagagagttc tggaagagaa
1681 tcaagaacat tatcatatag ttcaaaagtt tcttatcctg ggagacattg atggtttgat
1741 ggatgagttt agcaaatggc tttccaaaag cagaaacaat ctacctggac acctgcttcg
1801 ctttatgact caccttattt tgtttttccg tactctggga ctacagacca aggaggaagt
1861 ttctattgaa gttttaaaga catacataca gcttttaata agagagaaac atacaaatct
1921 tatagcattt tatacctgtc atttgcctca agacctagct gttgcccagt atgcattatt
1981 tttggaaagt gttacagaat ttgaacagcg ccaccattgc ctggagttgg ctaaagaagc
2041 agatttggat gttgcaacaa taacaaaaac tgtagttgag aatattcgaa agaaagataa
2101 tggtgaattt agtcatcatg acctggcccc agccctagat actggcacta ctgaggagga
2161 tcgtttaaaa attgatgtaa ttgactggtt ggtatttgac ccagcgcaga gggcagaagc
2221 actgaaacaa ggcaatgcaa ttatgagaaa attcttggca tcaaaaaagc acgaagctgc
2281 aaaagaagta tttgtgaaaa ttcctcagga ttctatagca gaaatctata atcagtgcga
2341 ggaacaagga atggaaagtc cacttcctgc tgaagatgat aatgctatcc gagaacattt
2401 gtgcatcaga gcttatttgg aagcccatga aacctttaat gagtggttta agcatatgaa
2461 ttcagttcca caaaaacctg ctttgatacc tcaaccaact tttactgaga aagtggctca
2521 tgaacacaaa gaaaagaaat atgaaatgga ttttggtatt tggaaagggc atttggatgc
2581 cctaactgct gatgtgaagg agaaaatgta taacgtcttg ttgtttgttg atggagggtg
2641 gatggtggat gttagagagg atgccaaaga agaccatgaa agaacacatc aaatggtctt
2701 actgagaaag ctttgtctgc caatgttgtg ttttctgctt catacgatat tgcacagtac
2761 tggtcagtat caggaatgcc tacagttagc agatatggta tcctctgagc gccacaaact
2821 gtacctggta ttttctaagg aagagctaag gaagttgctg cagaagctca gagagtcctc
2881 tctaatgctc ctagaccagg gacttgaccc attagggtat gaaattcagt tatagtttaa
2941 tctttgtaat ctcactaatt ttcatgataa atgaagtttt taataaaata tacttgttat
3001 tagt
//