LOCUS AK302764 2671 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55399 complete cds, highly similar to Protein
FAM38B.
ACCESSION AK302764
VERSION AK302764.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2671)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2671
/clone="TESTI4028089"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497388"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 141..2270
/codon_start=1
/note="highly similar to Protein FAM38B"
/protein_id="BAH13798.1"
/transl_table=1
/translation="MTESGMAREESDDELSLGHGRRDSSDSLKSINLAASVESVHVTF
PEQQTAVRRKRSGSSSEPSQRSSFSSNRSQRGSTSTRNSSQKGSSVLSIKQKGKRELY
MEKLQEHLIKAKAFTIKKTLEIYVPIKQFFYNLIHPEYSAVTDVYVLMFLADTVDFII
IVFGFWAFGKHSAAADITSSLSEDQVPGPFLVMVLIQFGTMVVDRALYLRKTVLGKVI
FQVILVFGIHFWMFFILPGVTERKFSQNLVAQLWYFVKCVYFGLSAYQIRCGYPTRVL
GNFLTKSYNYVNLFLFQGFRLVPFLTELRAVMDWVWTDTTLSLSSWICVEDIYAHIFI
LKCWRESEKRYPQPRGQKKKKVVKYGMGGMIIVLLICIVWFPLLFMSLIKSVAGVINQ
PLDVSVTITLGGYQPIFTMSAQQSQLKVMDQQSFNKFIQAFSRDTGAMQFLENYEKED
ITVAELEGNSNSLWTISPPSKQKMIHELLDPNSSFSVVFSWSIQRNLSLGAKSEIATD
KLSFPLKNITRKNIAKMIAGNSTESSKTPVTIEKIYPYYVKAPSDSNSKPIKQLLSEN
NFMDITIILSRDNTTKYNSEWWVLNLTGNRIYNPNSQALELVVFNDKVSPPSLGFLAG
YGIMGLYASVVLVIGKFVREFFSGISHSIMFEELPNVDRILKLCTDIFLVRETGELEL
EEDLYAKLIFLYRSPETMIKWTREKTN"
BASE COUNT 758 a 576 c 613 g 724 t
ORIGIN
1 atgttaacaa ttaatcagtt caagttggtc atcttcctag ataacctgga ccgtaatctt
61 cctagataac ctggacatca gaattggtga tggggctgag gggccagtga gtgtgccatg
121 gcttatggga tgaagatgac atgactgaaa gtggcatggc cagggaggaa tcagatgatg
181 agctctccct cggtcatggc aggagggact cctccgattc tctcaagtcc atcaacctgg
241 ccgcgtctgt ggagtcagtg catgtgacct tcccggagca gcagacagct gtccggagga
301 agcgctccgg cagcagctcc gagccatccc agagatccag cttttcttca aacagatccc
361 aaagaggcag cacaagcacc cgaaacagca gtcaaaaagg aagcagtgtt ttgagtatta
421 agcaaaaagg caaaagggaa ctttatatgg aaaagcttca agaacattta atcaaagcaa
481 aagcctttac cataaagaag acgctggaga tctatgtgcc catcaaacag ttcttttaca
541 acctcatcca cccggagtat agcgccgtga ctgacgtgta tgtactcatg ttcctggctg
601 acactgtgga cttcatcatc attgtcttcg gcttttgggc ctttgggaaa cactcagcag
661 ctgcagacat cacctcttca ctgtcagagg accaggtccc ggggccgttt ttggtgatgg
721 tcctcattca gtttggaacc atggtggtgg accgagccct ctacctcagg aagactgtac
781 tgggaaaggt catcttccag gtcattcttg tgttcggaat tcacttctgg atgttcttca
841 tcttacctgg tgtgactgag aggaaattca gccagaacct ggttgcccag ctttggtact
901 ttgtgaaatg tgtttacttc gggttgtctg cttaccagat ccgttgtggc tacccaacgc
961 gagtcctggg gaacttcctc accaagagct acaattacgt caacctcttc ttattccaag
1021 ggtttcgcct cgtgcccttt ttgactgagc tgagggcagt gatggactgg gtgtggacgg
1081 acacaacttt gagcctgtcc agctggatct gtgtggagga catctatgct cacatattca
1141 tcctgaagtg ttggcgggag tcggagaaga gataccctca gccacggggc cagaagaaga
1201 agaaagtggt gaagtatggc atgggaggaa tgatcatcgt cctgctcatc tgcattgtct
1261 ggtttcctct tctcttcatg tctttgatca aatctgtggc tggggtcatc aaccagcccc
1321 tggacgtctc cgtcacaatt accctgggag ggtatcagcc tattttcaca atgagtgccc
1381 aacaaagcca gttgaaagtt atggaccagc agagctttaa caaatttata caagcttttt
1441 ctagggacac cggtgctatg caatttctgg aaaattatga aaaagaagac ataacagtag
1501 cagaactgga aggaaactca aattctttgt ggaccatcag cccacccagt aagcagaaaa
1561 tgatacacga actcctggac cccaatagta gcttctctgt tgttttttca tggagtattc
1621 agagaaactt aagtctgggt gcaaaatcgg aaatagcaac agataagctt tcttttcctc
1681 ttaaaaatat tactcgaaag aatatcgcta aaatgatagc aggcaacagc acagaaagtt
1741 caaaaacacc agtgaccata gaaaagattt atccatatta tgtgaaagca cctagtgatt
1801 ctaactcaaa acctataaag caacttttat ctgaaaataa tttcatggat attaccatca
1861 ttttgtccag agacaataca actaaatata acagtgagtg gtgggttctc aacctgactg
1921 gaaacagaat atacaatccg aactctcagg ccctggaact ggtggtcttc aatgacaaag
1981 tcagtccccc aagtctgggg ttcctggctg gctatggtat tatgggatta tatgcttcag
2041 ttgtccttgt gattgggaaa tttgtccgtg aattcttcag tgggatttct cactccatca
2101 tgtttgaaga gcttccaaat gtggatcgaa ttttgaagtt gtgcacagat atttttttag
2161 ttcgagagac aggagaactg gagctagaag aagatctcta tgccaaatta atattcctat
2221 atcgctcacc agagacaatg atcaaatgga ctagagaaaa aacaaattga aaccttagaa
2281 cacagactgc aaataatgtt aacatttgaa ttttttttaa aagcacaata ttctcataag
2341 agctaagcat ttctagttcg acggaaatgg tttgtttctc ttctgatagg tagacaaaag
2401 gagctgatat ccttctgcag taaaagctac cttgcaagtt aaggcactgt tgaaaatgtt
2461 atttgtaact ccatttctct gaaatcaggg ctacttgctt tatgttttag tcaacagtgt
2521 ctcgcattct gattgatcat gtgaaggaat catttatggg ccccgtccct aagagaaaca
2581 gaagaggagt cagaaagaaa gatgcctgtg ttttcctctg tggggcccgt gcacttcctg
2641 gagagatgct acaatgcaat atacagcgct c
//