LOCUS AK302746 3490 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50924 partial cds, highly similar to Nuclear
receptor corepressor 1.
ACCESSION AK302746
VERSION AK302746.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3490)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3490
/clone="TESTI4026485"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497370"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 331..>3490
/codon_start=1
/note="highly similar to Nuclear receptor corepressor 1"
/protein_id="BAG63960.1"
/transl_table=1
/translation="MPIEDSSPEKGREEAASKGHVIYEGKSGHILSYDNIKNAREGTR
SPRTAHEISLKRSYESVEGNIKQGMSMRESPVSAPLEGLICRALPRGSPHSDLKERTV
LSGSIMQGTPRATTESFEDGLKYPKQIKRESPPIRAFEGAITKGKPYDGITTIKEMGR
SIHEIPRQDILTQESRKTPEVVQSTRPIIEGSISQGTPIKFDNNSGQSAIKHNVKCLI
TGPSKLSRGMPPLEIVPENIKVVERGKYEDVKAGETVRSRHTSVVSSGPSVLRSTLHE
APKAQLSPGIYDDTSARRTPVSYQNTMSRGSPMMNRTSDVTISSNKSTNHERKSTLTP
TQRESIPAKSPVPGVDPVVSHSPFDPHHRGSTAGEVYRSHLPTHLDPAMPFHRALDPA
AAYLFQRQLSPTPGYPSQYQLYAMENTRQTILNDYITSQQMQVNLRPDVARGLSPREQ
PLGLPYPATRGIIDLTNMPPTILVPHPGGTSTPPMDRITYIPGTQITFPPRPYNSASM
SPGHPTHLAAAASAEREREREREKERERERIAAASSDLYLRPGSEQPGRPGSHGYVRS
PSPSVRTQETMLQQRPSVFQGTNGTSVITPLDPTAQLRIMPLPAGGPSISQGLPASRY
NTAADALAALVDAAASAPQMDVSKTKESKHEAARLEENLRSRSAAVSEQQQLEQKTLE
VEKRSVQCLYTSSAFPSGKPQPHSSVVYSEAGKDKGPPPKSRYEEELRTRGKTTITAA
NFIDVIITRQIASDKDARERGSQSSDSSSSLSSHRYETPSDAIEVISPASSPAPPQEK
LQTYQPEVVKANQAENDPTRQYEGPLHHYRPQQESPSPQQQLPPSSQAEGMGQVPRTH
RLITLADHICQIITQDFARNRVSSQTPQQPPTSTFQNSPSALVSTPVRTKTSNRYSPE
SQAQSVHHQRPGSRVSPENLVDKSRGSRPGKSPERSHVSSEPYEPISPPQVPVVHEKQ
DSLLLLSQRGAEPAEQRNDARSPGSISYLPSFFTKLENTSPMVKSKKQEIFRKLNSSG
GGDSDMGKWDFFHEPQIKHALIM"
BASE COUNT 1022 a 907 c 817 g 744 t
ORIGIN
1 acagctactt tgccctacat caagcaggaa gaattttctc cccgaagcca aaactcacaa
61 cctgagggtc tgttggtcag ggcccaacat gaaggtgtag tcagaggtaa aatatgctgg
121 ttggcagaaa tgttaaactt ttgtccccaa taaatttatt aaagtaccgc aggagccata
181 caagaaggaa gtataactcg gggaactcca accagcaaaa tttcagtgga gagcattcca
241 tccctacggg gctctatcac tcagggcacc ccggctctgc cccagactgg cataccaaca
301 gaggctttgg tgaaggggtc catttcgaga atgcccattg aagacagcag tcctgagaaa
361 ggcagagagg aagctgcatc caaaggccat gttatttatg aaggcaaaag tggacatatc
421 ttgtcatatg ataatattaa gaatgcccga gaagggacta ggagtccaag aacagctcat
481 gaaatcagtt taaagagaag ctatgaatca gtggaaggaa atataaagca agggatgtca
541 atgagggagt ctcctgtatc agcaccgtta gaggggctga tatgccgagc attacccagg
601 gggagtcctc attctgacct caaagaaagg actgtattgt ctggctccat aatgcagggg
661 acaccaagag caacaactga aagctttgaa gatggcctta aatatcccaa acaaattaaa
721 agggaaagtc ctcccatacg agcatttgaa ggtgccatta ccaaaggaaa accatatgat
781 ggcatcacca ccatcaaaga aatggggcgt tccattcatg agattccaag gcaagatatt
841 ttaactcagg aaagtcggaa aactccagaa gtggtccaga gcacacggcc gataattgag
901 ggttccattt cccagggcac accaataaag tttgacaaca actcaggtca atctgccatc
961 aaacacaatg tcaaatgctt aatcacgggg cctagcaaac tatcccgtgg aatgcctccg
1021 ctggaaattg tgccagagaa cataaaagtg gtagaacggg gaaaatatga ggatgtgaaa
1081 gcaggcgaga ccgtgcgttc ccggcacacg tcagtggtaa gctctggccc ctccgttctt
1141 aggtccacac tgcatgaagc tcccaaagca caactgagcc ctgggattta tgatgacacc
1201 agtgcacgga ggacccctgt gagttatcaa aacaccatgt ccagaggctc acccatgatg
1261 aacagaactt ctgatgttac aatttcttct aacaagtcta ccaatcatga aaggaaatcg
1321 acactgaccc ctacccagag ggaaagtatc ccagcgaagt ctccagtgcc tggggtggac
1381 cctgtcgtga gccacagtcc gtttgatccc catcacagag gcagcactgc aggcgaggtt
1441 tatcggagcc acctgcccac gcacttggat ccagccatgc cttttcacag ggctttggat
1501 cctgcggctg cttacctgtt tcagagacag ctttcaccaa ctccaggtta cccaagtcag
1561 tatcagcttt acgcaatgga gaacacaaga cagacaatct taaatgatta cattacctca
1621 caacagatgc aagtgaactt gcgtccagat gtggccagag gactctcccc aagagagcag
1681 ccactgggtc tcccataccc agcaacgaga ggaatcattg acctgaccaa tatgcctcca
1741 acaattttag tgcctcatcc agggggaaca agcactcctc ccatggacag aatcacttat
1801 attcctggta cacagattac tttccctccc aggccgtaca actctgcttc catgtctcca
1861 ggacacccaa cacaccttgc agctgctgca agtgctgaga gggaacggga acgggagcgg
1921 gagaaggagc gggagcggga acggattgct gcagcttcct ccgacctcta cctgcggcca
1981 ggctcagaac agcctggccg acctggcagt catggatatg ttcgctcccc ttccccttca
2041 gtaagaactc aggagaccat gttgcaacag agacccagtg ttttccaagg aaccaatgga
2101 accagtgtaa tcacaccttt ggatccaact gctcagctac gaatcatgcc actgcctgct
2161 gggggccctt caataagcca aggcctgcca gcctcccgtt acaacactgc tgcggatgcc
2221 ctggctgctc ttgtggatgc tgcagcttct gcaccccaga tggatgtgtc caaaacaaaa
2281 gagagtaagc atgaagctgc caggttagaa gaaaatttga gaagcaggtc agcagcagtt
2341 agtgaacagc agcagctaga gcagaaaacc ctggaggtgg agaagagatc tgttcagtgt
2401 ttatacactt cttcagcctt tccaagtggc aagccccagc ctcattcttc agtagtttat
2461 tctgaggctg ggaaagataa agggcctcct ccaaaatcca gatatgagga agagctaagg
2521 accagaggga agactaccat tactgcagct aacttcatag acgtgatcat cacccggcaa
2581 attgcctcgg acaaggatgc gagggaacgt ggctctcaaa gttcagactc ttctagtagc
2641 ttatcttctc acaggtatga aacacctagc gatgctattg aggtgataag tcctgccagc
2701 tcacctgcgc caccccagga gaaactgcag acctatcagc cagaggttgt taaggcaaat
2761 caagcggaaa atgatcctac cagacaatat gaaggaccat tacatcacta tcgaccacag
2821 caggaatcac catctcccca acaacagctg cccccttctt cacaggcaga gggaatgggg
2881 caagtgccca ggacccatcg gctgatcaca cttgctgatc acatctgtca aattatcaca
2941 caagattttg ctagaaatcg agtttcctcg cagactcccc agcagcctcc tacttctaca
3001 ttccagaact caccttctgc tttggtatct acacctgtga ggactaaaac atcaaaccgt
3061 tacagcccag aatcccaggc tcagtctgtc catcatcaaa gaccaggttc aagggtctct
3121 ccagaaaatc ttgtggacaa atccagggga agtaggcctg gaaaatcccc agagaggagt
3181 cacgtctctt cggagcccta cgagcccatc tccccacccc aggttccggt tgtgcatgag
3241 aaacaggaca gcttgctgct cttgtctcag aggggcgcag agcctgcaga gcagaggaat
3301 gatgcccgct caccagggag tataagctac ttgccttcat tcttcaccaa gcttgaaaat
3361 acatcaccca tggttaaatc aaagaagcag gagatttttc gtaagttgaa ctcctctggt
3421 ggaggtgact ctgatatggg taagtgggat ttctttcatg aaccccaaat aaaacatgca
3481 ttaataatga
//