LOCUS AK302741 1078 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54947 complete cds, highly similar to
Reticulon-4.
ACCESSION AK302741
VERSION AK302741.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1078)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1078
/clone="TESTI4026179"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497365"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 138..926
/codon_start=1
/note="highly similar to Reticulon-4"
/protein_id="BAG63956.1"
/transl_table=1
/translation="MDLKEQPGNTISAGQEDFPSVLLETAASLPSLSPLSAASFKEHE
YLGNLSTVLPTEGTLQENVSEASKEVSEKAKTLLIDRDLTEFSELEYSEMGSSFSVPP
KAESAVIVANPREEIIVKNKDEEEKLVSNNILHNQQELPTALTKLVKEDEVVSSEKAK
DSFNEKRVAVEAPMREEYADFKPFERVWEVKDSKEDSDMLAAGGKIESNLESKVDKKC
FADSLEQTNHEEDSESSNDDTSFPSTPEGIKDVLELQVAAARLV"
BASE COUNT 358 a 199 c 242 g 279 t
ORIGIN
1 attgacccaa ccgcagtgaa gggagagcgc ctccagtggt gtggtgcgtg gagaaatggg
61 aaggagagag ttctgatgag accctttttg ctcttcctgc tgcatctgag cctgtgatac
121 gctcctctgc agaaaatatg gacttgaagg agcagccagg taacactatt tcggctggtc
181 aagaggattt cccatctgtc ctgcttgaaa ctgctgcttc tcttccttct ctgtctcctc
241 tctcagccgc ttctttcaaa gaacatgaat accttggtaa tttgtcaaca gtattaccca
301 ctgaaggaac acttcaagaa aatgtcagtg aagcttctaa agaggtctca gagaaggcaa
361 aaactctact catagataga gatttaacag agttttcaga attagaatac tcagaaatgg
421 gatcatcgtt cagtgtccct ccaaaagcag aatctgccgt aatagtagca aatcctaggg
481 aagaaataat cgtgaaaaat aaagatgaag aagagaagtt agttagtaat aacatccttc
541 ataatcaaca agagttacct acagctctta ctaaattggt taaagaggat gaagttgtgt
601 cttcagaaaa agcaaaagac agttttaatg aaaagagagt tgcagtggaa gctcctatga
661 gggaggaata tgcagacttc aaaccatttg agcgagtatg ggaagtgaaa gatagtaagg
721 aagatagtga tatgttggct gctggaggta aaatcgagag caacttggaa agtaaagtgg
781 ataaaaaatg ttttgcagat agccttgagc aaactaatca cgaagaagat agtgagagta
841 gtaatgatga tacttctttc cccagtacgc cagaaggtat aaaggatgtg ctcgagctgc
901 aggtcgcggc cgctagacta gtctagagaa aaaacctccc acacctcccc ctgaacctga
961 aacataaaat gaatgcaatt gttgttgtta acttgtttat tgcagcttat aatggttaca
1021 aataaagcaa tagcatcaca aatttcacaa ataaagcatt tttttcactg cattctag
//