LOCUS AK302737 2767 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53499 complete cds, highly similar to
Tetratricopeptide repeat protein 16.
ACCESSION AK302737
VERSION AK302737.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2767)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2767
/clone="TESTI4025994"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497361"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 68..2650
/codon_start=1
/note="highly similar to Tetratricopeptide repeat protein
16"
/protein_id="BAG63954.1"
/transl_table=1
/translation="MTDSDEDALKVDQGPSRDIPKPWVIPAPKGILQHIFGTSHVFQS
ICDVKPKVTGLTVPLKVREYYSRGQQCLEQADWETAVLLFSRALHLDPQLLCDFSSAA
QNLRRAYSLQQDNCKHLERLTFVLYLQGQCLFEQCAFLDALNVFSHAAELQPEKPCFR
YRCMACLLALKQHQACLTLITNELKQDTTNADVYIFRARLYNFLQKPHLCYRDLHSAL
LLNPKHPQARMLLQKMVAQAQQARQDAGILAVQGKLQHALQRINRAIENNPLDPSLFL
FRGTMYRRLQEFDGAVEDFLKVLDMVTEDQEDMLRQAQRQLLLTYNDFAVHCYRQGAY
QEGVLLLNKALRDEQQEKGLYINRGDCFFQLGNLAFAEADYQQALALSPQDEGANTRM
GLLQEKMGFCEQRRKQFQKAENHFSTAIRHNPQKAQYYLYRAKSRQLLQNIFGARQDV
ATVLLLNPKQPKLSLLMTNLFPGMSVEEVLSTQIAHLARLQLEQMVEGSLQAGSPQGI
VGMLKRHELERQKALALQHSWKQGEPLIATSEELKATPEIPQVKPGSSEGEAEAPEEE
EEKEKEKKEEKKSELIPSKVASLSDSYLDQTSSASSMSFRTTGTSETEMSAICQEYRS
TSATAVTFSDSSLLKTQSSDSGNNREALSHGPRKIKATQGQRQSLSKTEPTQSQRRNS
SKTKATIHKRNSSKTKATQSQRRNSSKTRATQGQGQSSSKTEATQGQRQSSSEIEATQ
GPRQEPSKTKTTRSPRQRPRKVKAARGRSWRPSKVDATQGRSRGLLRSSTKTEAFYDS
NWSLSKTEYAQGQGQRSSKAEGAQGKSQGMSSTSSKAESTWGPSPSLSKTEVDQDLTY
YEAV"
BASE COUNT 675 a 863 c 801 g 428 t
ORIGIN
1 agcaacgtca gggccagggc cgcgaggtag ttggcagagg cctcggggtc ctcctggaag
61 gggcctcatg acagattcgg acgaggatgc cctgaaggtt gaccagggcc cctcacggga
121 catcccaaag ccatgggtga ttccagcccc caaagggatc ctgcagcaca tctttgggac
181 cagccacgtg ttccaaagca tctgtgatgt aaaaccaaag gtcacagggt taacagtgcc
241 cctcaaagtc agggaatact actccagagg ccagcagtgc ttggagcagg cagactggga
301 gacagctgtg ctgctcttct cccgcgcact ccacctggac ccacagctgc tctgtgactt
361 ctcctcggcc gcccagaacc tgcgaagggc ctactcatta cagcaggaca actgcaagca
421 cctggagcgc ctcacctttg tgctctacct acagggacaa tgcctttttg agcagtgtgc
481 cttcctggat gccctgaatg tcttctcaca tgctgctgag ctccagcctg agaaaccatg
541 cttccgttac cgatgcatgg cctgtctcct ggccctcaag cagcatcagg cctgcctcac
601 gctcatcacc aacgagctga agcaggacac caccaacgcc gatgtctaca tcttccgggc
661 cagactctac aactttctcc agaagcccca cctctgctac cgggacctgc acagcgcctt
721 gctgttgaat cccaagcacc cgcaggccag gatgctgctc cagaagatgg tggcccaggc
781 ccagcaggcg cgccaagatg cggggatcct ggctgtgcag ggcaagctgc agcacgcact
841 gcagcggatc aaccgtgcca tcgagaacaa ccctctggac cccagtctct tcctcttccg
901 gggcaccatg taccgacggc tccaggagtt cgatggggca gtggaggact tcctgaaggt
961 gctggacatg gtgaccgagg accaggagga catgttgcgg caggcacagc gccagctgtt
1021 gctgacctac aacgactttg ccgtgcactg ctacaggcag ggcgcctacc aggagggcgt
1081 gctgctgctg aacaaggccc tccgggacga gcagcaggag aaaggactct acatcaaccg
1141 aggcgattgc ttcttccagc tgggcaacct ggcctttgcc gaggcggact accagcaggc
1201 gctggcgctg agccctcagg acgagggcgc caacacgcgc atgggcctgc tgcaggagaa
1261 gatgggcttc tgcgagcaga ggcgcaagca gttccagaag gcagagaacc acttctccac
1321 ggccatccgg cacaaccccc agaaggccca gtactacctg taccgggcca agagccggca
1381 gctgctgcag aacatttttg gggcccgcca ggatgtggcc actgtcctgc tcctcaaccc
1441 caagcaacca aagctgtccc tgctgatgac caacctcttc ccgggcatgt cggtggagga
1501 ggtgcttagc acccagatag cccacctggc caggctgcag ctggagcaga tggtggaggg
1561 cagcctgcag gccggcagcc cacaaggcat tgtggggatg cttaaacggc acgagttgga
1621 gcgccagaag gccttagccc tgcagcactc atggaagcag ggggagcctt tgattgcgac
1681 ctccgaggag ctgaaggcca cccctgagat tccgcaggta aaaccgggaa gctcagaggg
1741 agaggctgag gcccctgagg aggaggaaga aaaggagaag gagaaaaaag aggagaaaaa
1801 atcagagctc atacctagca aggtggcgtc cctgtctgac agctaccttg accagacctc
1861 ttcagcctcc agcatgagct tcaggaccac aggcacctca gagactgaga tgtcggctat
1921 ctgccaggaa tacaggagca cctcagccac cgccgtgaca ttctctgact cgtcactgtt
1981 gaagacgcaa tcctcggact ctgggaacaa cagggaggca ctaagccatg gtcccagaaa
2041 aatcaaggcc acccagggcc agaggcagag ccttagcaag actgagccca cccagagcca
2101 gaggcggaac tccagcaaga ccaaggccac tatacacaag aggaactcca gcaagaccaa
2161 ggccacccaa agccagaggc ggaactccag caagaccagg gccacccagg gccaggggca
2221 gagctccagc aagactgagg ccactcaggg ccagaggcag agctccagcg agattgaggc
2281 cacccagggc ccaaggcagg agcccagcaa gaccaagacc acccggagcc caaggcagag
2341 gcccagaaag gtcaaggctg ctcgtggccg gagctggaga cccagcaagg ttgatgccac
2401 ccagggccga agcaggggac tgctccgaag ttccaccaag actgaggctt tctatgactc
2461 aaactggagc ctcagcaaaa ctgagtatgc ccaaggccag ggccagaggt ccagcaaggc
2521 tgagggtgcc cagggcaaga gccagggcat gagctcaact tccagcaagg ccgagtccac
2581 ctggggaccc agcccaagtc tcagcaaaac tgaggttgat caggacctca cctactatga
2641 agctgtctga agggaccatc cagaccctcc cttcttgctg gggaggggac gagttctacc
2701 cacctcccca cactggcact cagccagctg cctccttcca gagcaattaa aagtcttagc
2761 aacagtc
//