LOCUS AK302730 3704 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58441 complete cds, highly similar to
Attractin precursor.
ACCESSION AK302730
VERSION AK302730.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3704)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3704
/clone="TESTI4024870"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497354"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 35..3505
/codon_start=1
/note="highly similar to Attractin precursor"
/protein_id="BAG63948.1"
/transl_table=1
/translation="MCSRGAVSAPGRWWLQRRQLRLTGSSGFVTDGPGNYKYKTKCTW
LIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPE
VVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGECKISNSSDTVECECSEN
WKGEACDIPHCTDNCGFPHRGICNSSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEY
SNLKLPRASHKAVVNGNIMWVVGGYMFNHSDYNMVLAYDLASREWLPLNRSVNNVVVR
YGHSLALYKDKIYMYGGKIDSTGNVTNELRVFHIHNESWVLLTPKAKEQYAVVGHSAH
IVTLKNGRVVMLVIFGHCPLYGYISNVQEYDLDKNTWSILHTQGALVQGGYGHSSVYD
HRTRALYVHGGYKAFSANKYRLADDLYRYDVDTQMWTILKDSRFFRYLHTAVIVSGTM
LVFGGNTHNDTSMSHGAQCFSSDFMAYDIACDRWSVLPRPDLHHDVNRFGHSAVLHNS
TMYVFGGFNSLLLSDILVFTSEQCDAHRSEAACLAAGPGIRCVWNTGSSQCISWALAT
DEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDCHWCNDHCVPRNHSCSEGQIS
IFRYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQECIALPENICGIGWHLVGNS
CLKITTAKENYDNAKLFCRNHNALLASLTTQKKVEFVLKQLRIMQSSQSMSKLTLTPW
VGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPSTRGLKAATCINPLN
GSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQ
CMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQ
APTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKH
CETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEVENRY
QGNPLRGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNRDLDMFINASKNFN
LNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNFTW
PIKIQVQTEQ"
BASE COUNT 1002 a 823 c 916 g 963 t
ORIGIN
1 aggcgaagcg gagccggccg tgcggtgtgt gtgtatgtgt tcgcggggcg ccgtctcagc
61 cccgggaaga tggtggctgc agcggcggca actgagacta actggatctt ctgggtttgt
121 gacagatgga cctggaaatt ataaatacaa aacgaagtgc acgtggctca ttgaaggaca
181 gccaaataga ataatgagac ttcgtttcaa tcattttgct acagagtgta gttgggacca
241 tttatatgtt tatgatgggg actcaattta tgcaccgcta gttgctgcat ttagtggcct
301 cattgttcct gagagagatg gcaatgagac tgtccctgag gttgttgcca catcaggtta
361 tgccttgctg cattttttta gtgatgctgc ttataatttg actggattta atattactta
421 cagttttgat atgtgtccaa ataactgctc aggccgagga gagtgtaaga tcagtaatag
481 cagcgatact gttgaatgtg aatgttctga aaactggaaa ggtgaagcat gtgacattcc
541 tcactgtaca gacaactgtg gttttcctca tcgaggcatc tgcaattcaa gtgatgtcag
601 aggatgctcc tgcttctcag actggcaggg tcctggatgt tcagttcctg taccagctaa
661 ccagtcattt tggactcgag aggaatattc taacttaaag ctccccagag catctcataa
721 agctgtggtc aatggaaaca ttatgtgggt tgttggagga tatatgttca accactcaga
781 ttataacatg gttctagcgt atgaccttgc ttctagggag tggcttccac taaaccgttc
841 tgtgaacaat gtggttgtta gatatggtca ttctttggca ttatacaagg ataaaattta
901 catgtatgga ggaaaaattg attcaactgg gaatgtgacc aatgagttga gagtttttca
961 cattcataat gagtcatggg tgttgttgac ccctaaggca aaggagcagt atgcagtggt
1021 tgggcactct gcacacattg ttacactgaa gaatggccga gtggtcatgc tggtcatctt
1081 tggtcactgc cctctctatg gatatataag caatgtgcag gaatatgatt tggataagaa
1141 cacatggagt atattacaca cccagggtgc ccttgtgcaa gggggttacg gccatagcag
1201 tgtttacgac cataggacca gggccctata cgttcatggt ggctacaagg ctttcagtgc
1261 caataagtac cggcttgcag atgatctcta ccgatatgat gtggataccc agatgtggac
1321 cattcttaag gacagccgat ttttccgtta cttgcacaca gctgtgatag tgagtggaac
1381 catgctggtg tttggaggaa acacacacaa tgacacatct atgagccatg gcgcccaatg
1441 cttctcttca gatttcatgg cctatgacat tgcctgtgac cgctggtcag tgcttcccag
1501 acctgatctc caccatgatg tcaacagatt tggccattca gcagtcttac acaacagcac
1561 catgtatgtg ttcggtggtt tcaatagtct cctcctcagc gacatcctgg tattcacctc
1621 ggaacagtgt gatgcgcatc ggagtgaagc cgcttgttta gcagcaggac ctggtattcg
1681 gtgtgtgtgg aacacagggt cgtctcagtg tatctcgtgg gcgctggcaa ctgatgaaca
1741 agaagaaaag ttaaaatcag aatgtttttc caaaagaact cttgaccatg acagatgtga
1801 ccagcacaca gattgttaca gctgcacagc caacaccaat gactgccact ggtgcaatga
1861 ccattgtgtc cccaggaacc acagctgctc agaaggccag atctccattt ttaggtatga
1921 gaattgcccc aaggataacc ccatgtacta ctgtaacaag aagaccagct gcaggagctg
1981 tgccctggac cagaactgcc agtgggagcc ccggaatcag gagtgcattg ccctgcccga
2041 aaatatctgt ggcattggct ggcatttggt tggaaactca tgtttgaaaa ttactactgc
2101 caaggagaat tatgacaatg ctaaattgtt ctgtaggaac cacaatgccc ttttggcttc
2161 tcttacaacc cagaagaagg tagaatttgt ccttaagcag ctgcgaataa tgcagtcatc
2221 tcagagcatg tccaagctca ccttaacccc atgggtcggc cttcggaaga tcaatgtgtc
2281 ctactggtgc tgggaagata tgtccccatt tacaaatagt ttactacagt ggatgccgtc
2341 tgagcccagt gatgctggat tctgtggaat tttatcagaa cccagtacac ggggactgaa
2401 ggctgcaacc tgcatcaacc cactcaatgg tagtgtctgt gaaaggcctg caaaccacag
2461 tgctaagcag tgccggacac catgtgcctt gaggacagca tgtggagatt gcaccagcgg
2521 cagctctgag tgcatgtggt gcagcaacat gaagcagtgt gtggactcca atgcctatgt
2581 ggcctccttc ccttttggcc agtgtatgga atggtatacg atgagcacct gcccccctga
2641 aaattgttca ggctactgta cctgtagtca ttgcttggag caaccaggct gtggctggtg
2701 tactgatccc agcaatactg gcaaagggaa atgcatagag ggttcctata aaggaccagt
2761 gaagatgcct tcgcaagccc ctacaggaaa tttctatcca cagcccctgc tcaattccag
2821 catgtgtcta gaggacagca gatacaactg gtctttcatt cactgtccag cttgccaatg
2881 caacggccac agtaaatgca tcaatcagag catctgtgag aagtgtgaga acctgaccac
2941 aggcaagcac tgcgagacct gcatatctgg cttctacggt gatcccacca atggagggaa
3001 atgtcagcca tgcaagtgca atgggcacgc gtctctgtgc aacaccaaca cgggcaagtg
3061 cttctgcacc accaagggcg tcaaggggga cgagtgccag ctatgtgagg tagaaaatcg
3121 ataccaagga aaccctctca gaggaacatg ttattatact cttcttattg actatcagtt
3181 cacctttagt ctatcccagg aagatgatcg ctattacaca gctatcaatt ttgtggctac
3241 tcctgacgaa caaaacaggg atttggacat gttcatcaat gcctccaaga atttcaacct
3301 caacatcacc tgggctgcca gtttctcagc tggaacccag gctggagaag agatgcctgt
3361 tgtttcaaaa accaacatta aggagtacaa agatagtttc tctaatgaga agtttgattt
3421 tcgcaaccac ccaaatatca ctttctttgt ttatgtcagt aatttcacct ggcccatcaa
3481 aattcaggtg caaactgaac aatgaggacg catggacaca ggaaggggaa catcacacac
3541 cagggcctgt tgtggggtgg ggggaagggg aagggatagc attaggggat atacctaatg
3601 ttaaatgacg agttaatggg tgcagcacac caacatggca tatgtataca tatgtaacaa
3661 acctgcatgt tgtgcacatg taccctaaaa cttaaagtat aatt
//