LOCUS AK302728 3716 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ55308 complete cds, highly similar to Tubulin--tyrosine ligase-like protein 4. ACCESSION AK302728 VERSION AK302728.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3716) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3716 /clone="TESTI4024772" /clone_lib="TESTI4" /db_xref="H-InvDB:HIT000497352" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="testis" CDS 412..3333 /codon_start=1 /note="highly similar to Tubulin--tyrosine ligase-like protein 4" /protein_id="BAG63947.1" /transl_table=1 /translation="MVFSMAQPMASSSTEPYLCLAAAGENPSGKSLASAISGKIPSPL SSSYKPMLNNNSFMWPNSTPVPLLQTTQGLKPVSPPKIQPVSWHHSGGTGDCAPQPVD HKVPKSIGTVPADASAHIALSTASSHDTSTTSVASSWYNRNNLAMRAEPLSCALDDSS DSQDPTKEIRFTEAVRKLTARGFEKMPRQGCQLEQSSFLNPSFQWNVLNRSRRWKPPA VNQQFPQEDAGSVRRVLPGASDTLGLDNTVFCTKRISIHLLASHASGLNHNPACESVI DSSAFGEGKAPGPPFPQTLGIANVATRLSSIQLGQSEKERPEEARELDSSDRDISSAT DLQPDQAETEDTEEELVDGLEDCCSRDENEEEEGDSECSSLSAVSPGESVAMISRSCM EILTKPLSNHEKVVRPALIYSLFPNVPPTIYFGTRDERVEKLPWEQRKLLRWKMSTVT PNIVKQTIGRSHFKISKRNDDWLGCWGHHMKSPSFRSIREHQKLNHFPGSFQIGRKDR LWRNLSRMQSRFGKKEFSFFPQSFILPQDAKLLRKAWESSSRQKWIVKPPASARGIGI QVIHKWSQLPKRRPLLVQRYLHKPYLISGSKFDLRIYVYVTSYDPLRIYLFSDGLVRF ASCKYSPSMKSLGNKFMHLTNYSVNKKNAEYQANADEMACQGHKWALKALWNYLSQKG VNSDAIWEKIKDVVVKTIISSEPYVTSLLKMYVRRPYSCHELFGFDIMLDENLKPWVL EVNISPSLHSSSPLDISIKGQMIRDLLNLAGFVLPNAEDIISSPSSCSSSTTSLPTSP GDKCRMAPEHVTAQKMKKAYYLTQKIPDQDFYASVLDVLTPDDVRILVEMEDEFSRRG QFERIFPSHISSRYLRFFEQPRYFNILTTQWEQKYHGNKLKGVDLLRSWCYKGFHMGV VSDSAPVWSLPTSLLTISKDDVILNAFSKSETSKLGNPVPQRTVRTPAKSPAFLPRRY L" BASE COUNT 882 a 1055 c 915 g 864 t ORIGIN 1 agactctcgg tctgtccgct gggggcgcgc gcggtgtgtg gcaggcggca gcggcgctgg 61 cggccgagtg cgcttgtcac gcgtggcggt gcgtggttgc taggggcgcc tgaggctgcc 121 gggtagccca gcaggccgag ggaggaagca gcatatttct tttgccccag cactttatgt 181 agctctggga ccacggctgt cattgcaggc cacagcagtt cctgttacct acactctctc 241 ccggacttgt tcaacagcac cctgctatac cgccgctcca gctataggca aaaaccgtac 301 cagcaactgg agtctttctg cttgcgttcg agcccatcag aaaaaagccc tttttctctc 361 cctcaaaaga gcctccctgt cagtctcact gccaacaagg ccacttcttc catggtcttc 421 tccatggccc agcccatggc ctcctcatcc acagaaccat acctctgctt ggcagcggct 481 ggggaaaacc cttcagggaa gagcctggcc tctgccatct cagggaagat cccatctcca 541 ctctcttcct cctataagcc catgctgaat aataattcct tcatgtggcc aaatagcacg 601 ccagtgcctt tattgcagac cacacagggc ctgaagccag tatcgccacc caagatccag 661 cctgtctcct ggcatcattc agggggtact ggagactgtg caccgcagcc tgttgaccat 721 aaggtgccca aaagcattgg cactgtccca gctgatgcca gtgcccatat cgccttgtct 781 accgctagct cccacgacac atccaccacc agtgttgcct cttcctggta taaccggaat 841 aacttagcca tgagggcaga gccactttcc tgtgctctgg atgacagctc tgattcccag 901 gatccaacta aggagattcg gttcactgag gccgtgagga aattgaccgc aagaggcttt 961 gagaagatgc cgaggcaagg ctgccagctt gaacagtcta gtttcctgaa ccccagcttc 1021 cagtggaatg tcctcaacag gagcaggcgg tggaaacctc ctgcggtaaa tcagcagttt 1081 cctcaggagg atgctggatc ggtcaggcgg gtcctccctg gtgcctcaga taccttgggg 1141 ttggacaata cagtcttctg taccaagcgt atcagcattc acctccttgc ctcacatgcc 1201 agtgggctca atcacaaccc tgcctgtgaa tctgtaattg actcctcagc atttggagaa 1261 ggcaaagctc caggtccccc ttttcctcaa actcttggca tagccaacgt ggccacccgc 1321 ctctcttcca tccagctggg ccagtctgag aaggagagac ctgaggaggc cagggagctg 1381 gactcatctg atagggatat tagttcagct actgacctcc agccagatca ggctgagact 1441 gaagatacag aagaagaact agtagatggt ttggaagact gttgtagccg tgatgagaat 1501 gaagaggagg agggagactc agagtgctcc tcattaagtg ctgtctcccc cggcgaatcg 1561 gtggccatga tctctagaag ctgtatggaa attctgacca aacccctttc caatcatgag 1621 aaagttgtcc gaccagccct catctacagt ctctttccca acgttccccc taccatctat 1681 tttggcactc gggatgagag agtggagaaa cttccctggg agcagaggaa gttgctccga 1741 tggaagatga gcacagtgac ccccaacatt gtcaagcaga ccattggacg gtcccacttc 1801 aaaatcagca aaagaaacga tgactggctg ggctgctggg gtcaccacat gaagtctcct 1861 agtttccgat ccattcgaga gcatcagaag ctaaaccatt tcccaggctc attccagatt 1921 gggaggaagg accggctatg gcggaacctg tcacgtatgc agagccgctt tggcaagaag 1981 gagttcagtt tcttccccca gtcctttatc ctgccccagg acgccaagct cctgcgcaaa 2041 gcgtgggaga gcagcagccg ccaaaagtgg attgtgaagc caccagcatc agctcgaggc 2101 attggcatcc aggttattca caagtggagt cagctcccca agcgaaggcc cctcctggta 2161 cagaggtatc tacacaaacc ctacctcatc agcggcagca agtttgacct gcggatctat 2221 gtttatgtca cttcctacga tcctctgcgg atttacctct tttcagatgg actggtccgc 2281 tttgccagtt gcaagtattc gccttccatg aagagccttg gcaataagtt catgcacctg 2341 accaactaca gtgtcaataa aaagaatgcc gagtaccagg ccaatgcaga tgaaatggct 2401 tgccagggcc acaaatgggc actgaaggct ttgtggaact acctgagcca gaagggagtc 2461 aatagcgacg ccatctggga gaagataaag gatgttgttg tcaaaactat catctcgtca 2521 gagccctatg tgaccagcct gctcaagatg tatgtgcgac ggccctatag ctgccatgaa 2581 ctctttggtt ttgacatcat gctagacgaa aacctcaagc cctgggtcct ggaagtcaac 2641 atttccccaa gcctccactc cagctctcca ctggatatca gcatcaaagg ccagatgatt 2701 cgtgaccttc tgaatctggc aggttttgtc ctgcccaatg cagaggatat catttccagc 2761 cccagcagct gcagcagctc caccaccagc ctgcccacct cccctgggga caaatgtcga 2821 atggctccag agcatgtcac tgcacagaag atgaagaaag cctattatct gacccagaaa 2881 attcctgatc aggacttcta tgcatctgtg ctggatgtcc tgacaccaga tgatgttcgg 2941 attctggttg agatggaaga tgagttttct cgccgtggtc agtttgaacg aatttttcct 3001 tctcatatct cctctcgcta tctccgcttt tttgagcagc cacgatattt caacattctc 3061 accacccaat gggaacagaa ataccatggc aacaagctta aaggagtaga tctgctccgg 3121 agttggtgct acaaagggtt ccacatggga gttgtctctg attctgctcc agtgtggtct 3181 ctcccgacat cacttctgac tatctcaaag gatgacgtga tactcaatgc cttcagcaaa 3241 tcagagacta gcaagctggg aaacccagtt cctcaaagga cagtgaggac accagcaaag 3301 agcccagcct ttctacccag acgttacctg tgatcaagtg ctctgggcag acttcaagac 3361 tttctgcttc ctccactttc cagtcaatca gtgactccct cctggctgtg agcccataac 3421 tggcctctct ccaaaagcct ctgcccagga gcatgggcat cagctacctc acgggaacca 3481 gcctgctgtt cagaccagtc tgacccccta cccctttcac cctgtccctc ctcagagtat 3541 tttttgaagt ggttgcatta tagagatggg tatttgtagg gccggaggga tggtagtgat 3601 ggggagaagg tgaggaaggg tcaccctctg tcacctgtct gcctggctgg cacctcatat 3661 ctcagcagag aagccagtgg tggccacgca gccttataaa gcaggttttg gtttct //