LOCUS AK302719 2706 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ51157 complete cds, highly similar to Histone
deacetylase 4.
ACCESSION AK302719
VERSION AK302719.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2706)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2706
/clone="TESTI4024011"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497343"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 610..2616
/codon_start=1
/note="highly similar to Histone deacetylase 4"
/protein_id="BAH13789.1"
/transl_table=1
/translation="MVLLEQPPAQAPLVTGLGALPLHAQSLVGADRVSPSIHKLRQHR
PLGRTQSAPLPQNAQALQHLVIQQQHQQFLEKHKQQFQQQQLQMNKIIPKPSEPARQP
ESHPEETEEELREHQALLDEPYLDRLPGQKEAHAQAGVQVKQEPIESDEEEAEPPREV
EPGQRQPSEQELLFRQQALLLEQQRIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSP
ASATFPVSVQEPPTKPRFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQET
GLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGSLASVFVRLP
CGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEEST
PMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYD
DGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAP
DVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAIC
DASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVMEIHSKYWRCLQRTTFTAGR
SLIEAQTCENEEAETVTAMASLSVGVKPAEKRPDEEPMEEEPPL"
BASE COUNT 542 a 905 c 820 g 439 t
ORIGIN
1 atatcaggcc agctgtgacc ctagaggagt aggccatatc agccagccac atccctggag
61 ccgtgggctg tattggtcca gctgtgaccc tagagcttct gaaccgaatc tgaaattacg
121 gtccaggcta aagcagaaag tggccgaaag acggagcagc cccctgttac gcaggaaaga
181 cgggccagtg gtcactgctc taaaaaagcg tccgttggat gtcacagact ccgcgtgcag
241 cagcgcccca ggctccggac ccagctcacc caacaacagc tccgggagcg tcagcgcgga
301 gaacggtatc gcgcccgccg tccccagcat cccggcggag acgagtttgg cgcacagact
361 tgtggcacga gaaggctcgg ccgctccact tcccctctac acatcgccat ccttgcccaa
421 catcacgctg ggcctgcctg ccaccggccc ctctgcgggc acggcgggcc agcaggacgc
481 cgagagactc acccttcccg ccctccagca gaggctctcc cttttccccg gcacccacct
541 cactccctac ctgagcacct cgcccttgga gcgggacgga ggggagcgca cagccctctt
601 ctgcagcaca tggtcttact ggagcagccg ccggcacaag cacccctcgt cacaggcctg
661 ggagcactgc ccctccacgc acagtccttg gttggtgcag accgggtgtc cccctccatc
721 cacaagctgc ggcagcaccg cccactgggg cggacccagt cggccccgct gccccagaac
781 gcccaggctc tgcagcacct ggtcatccag cagcagcatc agcagtttct ggagaaacac
841 aagcagcagt tccagcagca gcaactgcag atgaacaaga tcatccccaa gccaagcgag
901 ccagcccggc agccggagag ccacccggag gagacggagg aggagctccg tgagcaccag
961 gctctgctgg acgagcccta cctggaccgg ctgccggggc agaaggaggc gcacgcacag
1021 gccggcgtgc aggtgaagca ggagcccatt gagagcgatg aggaagaggc agagccccca
1081 cgggaggtgg agccgggcca gcgccagccc agtgagcagg agctgctctt cagacagcaa
1141 gccctcctgc tggagcagca gcggatccac cagctgagga actaccaggc gtccatggag
1201 gccgccggca tccccgtgtc cttcggcggc cacaggcctc tgtcccgggc gcagtcctca
1261 cccgcgtctg ccaccttccc cgtatctgtg caggagcccc ccaccaagcc gaggttcacg
1321 acaggcctcg tgtatgacac gctgatgctg aagcaccagt gcacctgcgg gagtagcagc
1381 agccaccccg agcacgccgg gaggatccag agcatctggt cccgcctgca ggagacgggc
1441 ctccggggca aatgcgagtg catccgcgga cgcaaggcca ccctggagga gctacagacg
1501 gtgcactcgg aagcccacac cctcctgtat ggcacgaacc ccctcaaccg gcagaaactg
1561 gacagtaaga aacttctagg ctcgctcgcc tccgtgttcg tccggctccc ttgcggtggt
1621 gttggggtgg acagtgacac catatggaac gaggtgcact cggcgggggc agcccgcctg
1681 gctgtgggct gcgtggtaga gctggtcttc aaggtggcca caggggagct gaagaatggc
1741 tttgctgtgg tccgcccccc tggacaccat gcggaggaga gcacgcccat gggcttttgc
1801 tacttcaact ccgtggccgt ggcagccaag cttctgcagc agaggttgag cgtgagcaag
1861 atcctcatcg tggactggga cgtgcaccat ggaaacggga cccagcaggc tttctacagc
1921 gaccccagcg tcctgtacat gtccctccac cgctacgacg atgggaactt cttcccaggc
1981 agcggggctc ctgatgaggt gggcacaggg cccggcgtgg gtttcaacgt caacatggct
2041 ttcaccggcg gcctggaccc ccccatggga gacgctgagt acttggcggc cttcagaacg
2101 gtggtcatgc cgatcgccag cgagtttgcc ccggatgtgg tgctggtgtc atcaggcttc
2161 gatgccgtgg agggccaccc cacccctctt gggggctaca acctctccgc cagatgcttc
2221 gggtacctga cgaagcagct gatgggcctg gctggcggcc ggattgtcct ggccctcgag
2281 ggaggccacg acctgaccgc catttgcgac gcctcggaag catgtgtttc tgccttgctg
2341 ggaaacgagc ttgatcctct cccagaaaag gttttacagc aaagacccaa tgcaaacgct
2401 gtccgttcca tggagaaagt catggagatc cacagcaagt actggcgctg cctgcagcgc
2461 acaaccttca cagcggggcg ttctctgatc gaggctcaga cttgcgagaa cgaagaagcc
2521 gagacggtca ccgccatggc ctcgctgtcc gtgggcgtga agcccgccga aaagagacca
2581 gatgaggagc ccatggaaga ggagccgccc ctgtagcact ccctcgaagc tgctgttctc
2641 ttgtctgtct gtctctgtct tgaagctcag ccaagaaact ttcccgtgtc acgcctgcgt
2701 cccacc
//