LOCUS AK302698 2840 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50301 complete cds, highly similar to
Voltage-dependent L-type calcium channel subunit alpha-1C.
ACCESSION AK302698
VERSION AK302698.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2840)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2840
/clone="TESTI4022463"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497322"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 283..2772
/codon_start=1
/note="highly similar to Voltage-dependent L-type calcium
channel subunit alpha-1C"
/protein_id="BAH13781.1"
/transl_table=1
/translation="MFIVSQNAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTF
IKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALNDTTEINRNNNFQTFPQAVLLLFR
CATGEAWQDIMLACMPGKKCAPESEPSNSTEGETPCGSSFAVFYFISFYMLCAFLIIN
LFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPP
LGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEEL
RAIIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKP
SQRNALSLQAGLRTLHDIGPEIRRAISGDLTAEEELDKAMKEAVSAASEDDIFRRAGG
LFGNHVSYYQSDGRSAFPQTFTTQRPLHINKAGSSQGDTESPSHEKLVDSTFTPSSYS
STGSNANINNANNTALGRLPRPAGYPSTVSTVEGHGPPLSPAIRVQEVAWKLSSNRCH
SRESQAAMAGQEETSQDETYEVKMNHDTEACSEPSLLSTEMLSYQDDENRQLTLPEED
KRDIRQSPKRGFLRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVA
GLSPLLQRSHSPASFPRPFATPPATPGSRGWPPQPVPTLRLEGVESSEKLNSSFPSIH
CGSWAETTPGGGGSSAARRVRPVSLMVPSQAGAPGRQFHGSASSLVEAVLISEGLGQF
AQDPKFIEVTTQELADACDMTIEEMESAADNILSGGAPQSPNGALLPFVNCRDAGQDR
AGGEEDAGCVLARGRPSEEELQDSRVYVSSL"
BASE COUNT 605 a 884 c 806 g 545 t
ORIGIN
1 aaaaaaaaca gctgggtggg gcagaggtta tccttgacat ctccctccag ccccccttct
61 cattgctgga gcctcctgtt gccctcggag tcccttccag cttcttccca ctttcggcaa
121 cagcccccac ccccaacaaa cctaatgcta ccaagatgcc ttgtttcaaa atgaagtgat
181 tccagcacag tcattcatgc tgggtggtag caactcagtg agctgccctt ctaatagatc
241 attgtacctt gaagagaagg cgatgcttaa cctgcaggtg gaatgtttat tgtatctcag
301 aacgcagagg aaaactcccg catctccatc accttcttcc gcctgttccg ggtcatgcgt
361 ctggtgaagc tgctgagccg tggggagggc atccggacgc tgctgtggac cttcatcaag
421 tccttccagg ccctgcccta tgtggccctc ctgatcgtga tgctgttctt catctacgcg
481 gtgatcggga tgcaggtgtt tgggaaaatt gccctgaatg ataccacaga gatcaaccgg
541 aacaacaact ttcagacctt cccccaggcc gtgctgctcc tcttcaggtg tgccaccggg
601 gaggcctggc aggacatcat gctggcctgc atgccaggca agaagtgtgc cccagagtcc
661 gagcccagca acagcacgga gggtgaaaca ccctgtggta gcagctttgc tgtcttctac
721 ttcatcagct tctacatgct ctgtgccttc ctgatcatca acctctttgt agctgtcatc
781 atggacaact ttgactacct gacaagggac tggtccatcc ttggtcccca ccacctggat
841 gagtttaaaa gaatctgggc agagtatgac cctgaagcca agggtcgtat caaacacctg
901 gatgtggtga ccctcctccg gcggattcag ccgccactag gttttgggaa gctgtgccct
961 caccgcgtgg cttgcaaacg cctggtctcc atgaacatgc ctctgaacag cgacgggaca
1021 gtcatgttca atgccaccct gtttgccctg gtcaggacgg ccctgaggat caaaacagaa
1081 gggaacctag aacaagccaa tgaggagctg cgggcgatca tcaagaagat ctggaagcgg
1141 accagcatga agctgctgga ccaggtggtg ccccctgcag gtgatgatga ggtcaccgtt
1201 ggcaagttct acgccacgtt cctgatccag gagtacttcc ggaagttcaa gaagcgcaaa
1261 gagcagggcc ttgtgggcaa gccctcccag aggaacgcgc tgtctctgca ggctggcttg
1321 cgcacactgc atgacatcgg gcctgagatc cgacgggcca tctctggaga tctcaccgct
1381 gaggaggagc tggacaaggc catgaaggag gctgtgtccg ctgcttctga agatgacatc
1441 ttcaggaggg ccggtggcct gttcggcaac cacgtcagct actaccaaag cgacggccgg
1501 agcgccttcc cccagacctt caccactcag cgcccgctgc acatcaacaa ggcgggcagc
1561 agccagggcg acactgagtc gccatcccac gagaagctgg tggactccac cttcaccccg
1621 agcagctact cgtccaccgg ctccaacgcc aacatcaaca acgccaacaa caccgccctg
1681 ggtcgcctcc ctcgccccgc cggctacccc agcacggtca gcactgtgga gggccacggg
1741 ccccccttgt cccctgccat ccgggtgcag gaggtggcgt ggaagctcag ctccaacagg
1801 tgccactccc gggagagcca ggcagccatg gcgggtcagg aggagacgtc tcaggatgag
1861 acctatgaag tgaagatgaa ccatgacacg gaggcctgca gtgagcccag cctgctctcc
1921 acagagatgc tctcctacca ggatgacgaa aatcggcaac tgacgctccc agaggaggac
1981 aagagggaca tccggcaatc tccgaagagg ggtttcctcc gctctgcctc actaggtcga
2041 agggcctcct tccacctgga atgtctgaag cgacagaagg accgaggggg agacatctct
2101 cagaagacag tcctgccctt gcatctggtt catcatcagg cattggcagt ggcaggcctg
2161 agccccctcc tccagagaag ccattcccct gcctcattcc ctaggccttt tgccacccca
2221 ccagccacac ctggcagccg aggctggccc ccacagcccg tccccaccct gcggcttgag
2281 ggggtcgagt ccagtgagaa actcaacagc agcttcccat ccatccactg cggctcctgg
2341 gctgagacca cccccggtgg cgggggcagc agcgccgccc ggagagtccg gcccgtctcc
2401 ctcatggtgc ccagccaggc tggggcccca gggaggcagt tccacggcag tgccagcagc
2461 ctggtggaag cggtcttgat ttcagaagga ctggggcagt ttgctcaaga tcccaagttc
2521 atcgaggtca ccacccagga gctggccgac gcctgcgaca tgaccataga ggagatggag
2581 agcgcggccg acaacatcct cagcgggggc gccccacaga gccccaatgg cgccctctta
2641 ccctttgtga actgcaggga cgcggggcag gaccgagccg ggggcgaaga ggacgcgggc
2701 tgtgtgctcg cgcggggtcg accgagtgag gaggagctcc aggacagcag ggtctacgtc
2761 agcagcctgt agtgggcgct gccagatgcg ggcttttttt tatttgtttc aatgttccta
2821 atgggttcgt ttcagaagtg
//