LOCUS AK302676 3165 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52369 complete cds, highly similar to Nuclear
pore complex protein Nup214.
ACCESSION AK302676
VERSION AK302676.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3165)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3165
/clone="TESTI4020250"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497300"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 293..3043
/codon_start=1
/note="highly similar to Nuclear pore complex protein
Nup214"
/protein_id="BAG63908.1"
/transl_table=1
/translation="MKSSLLLRGVHFCFHLPGTAKIETAVTSTPSAPGQFSKPFSFSP
SGTGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSG
ITSASNTTPGEPAASSSRPVAPSGTALSTTSSKLETPPSKLGELLFPSSLAGETLGSF
SGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSA
TTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTV
PPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSALPEKPGDS
EVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAE
AAPATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIV
APGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATPVFGQVAASTA
PSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAA
SVFSFSQPGFSSVPAFGQPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLF
GQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSVFGQAAS
TGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTA
TSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKTGGFGA
APVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSS
NTTSFGTLASQNAPTFGSLSQQTSGFGTQSSGFSGFGSGTGGFSFGSNNSSVQGFGGW
RS"
BASE COUNT 714 a 921 c 767 g 763 t
ORIGIN
1 acagttggta tcatgtacgc ctcacatgag aaggaggtat ctagcacttc tcgaccaggg
61 cctaaagctt tatgttaaaa ggaaaattat atagtagaac tgtcaaagac ttgagtattt
121 tacaaaaagg ttttgaaaga tcatatactc ttttttcaag gacttcattg gagaggtttt
181 tgtcactctt ggagttagaa tcaaagaaac ctaaggaact ttgctttatg catgtctggg
241 caagtagtgt gacttgcaag aaatttccga gattcaccat tcattgctga tcatgaaatc
301 ctctcttttg ttacgaggtg ttcacttctg ttttcacttg ccagggacag ccaagataga
361 aacagctgtg acttcaaccc catctgctcc tgggcagttc agcaagcctt tctcattttc
421 tccatcaggg actggcttta attttgggat aatcacacca acaccgtctt ctaatttcac
481 tgctgcacaa ggggcaacac cctccactaa agagtcaagc cagccggacg cattctcatc
541 tggtggggga agcaaacctt cttatgaggc cattcctgaa agctcacctc cctcaggaat
601 cacatccgca tcaaacacca ccccaggaga acctgccgca tctagcagca gacctgtggc
661 accttctgga actgctcttt ccaccacctc tagtaagctg gaaaccccac cgtccaagct
721 gggagagctt ctgtttccaa gttctttggc tggagagact ctgggaagtt tttcaggact
781 gcgggttggc caagcagatg attctacaaa accaaccaat aaggcttcat ccacaagcct
841 aactagtacc cagccaacca agacgtcagg cgtgccctca gggtttaatt ttactgcccc
901 cccggtgtta gggaagcaca cggagccccc tgtgacatcc tctgcaacca ccacctcagt
961 agcaccacca gcagccacca gcacttcctc aactgccgtt tttggcagtc tgccagtcac
1021 cagtgcagga tcctctgggg tcatcagttt tggtgggaca tctctaagtg ctggcaagac
1081 tagtttttca tttggaagcc aacagaccaa tagcacagtg cccccatctg ccccaccacc
1141 aactacagct gccactcccc ttccaacatc attccccaca ttgtcatttg gtagcctcct
1201 gagttcagca actaccccct ccctgcctat gtccgctggc agaagcacag aagaggccac
1261 ttcatcagct ttgcctgaga agccaggtga cagtgaggtc tcagcatcag cagcctcact
1321 tctagaggag caacagtcag cccagcttcc ccaggctcct ccgcaaactt ctgactctgt
1381 taaaaaagaa cctgttcttg cccagcctgc agtcagcaac tctggcactg cagcatctag
1441 tactagtctt gtagcacttt ctgcagaggc tgccccagcc accacggggg tccctgatgc
1501 caggacggag gcagtaccac ctgcttcctc cttttctgtg cctgggcaga ctgctgtcac
1561 agcagctgct atctcaagtg caggccctgt ggccgtcgaa acatcaagta cccccatagc
1621 ctccagcacc acgtccattg ttgctcccgg cccatctgca gaggcagcag catttggtac
1681 cgtcacttct ggctcatccg tctttgctca gcctcctgct gccagttcta gctcagcttt
1741 caaccagctc accaacaaca cagccactgc cccctctgcc acgcccgtgt ttgggcaagt
1801 ggcagccagc accgcaccaa gtctgtttgg gcagcagact ggtagcacag ccagcacagc
1861 agctgccaca ccacaggtca gcagctcagg gtttagcagc ccagcttttg gtaccacagc
1921 cccaggggtc tttggacaga caaccttcgg gcaggcctca gtctttgggc agtcggcgag
1981 cagtgctgca agtgtctttt ccttcagtca gcctgggttc agttccgtgc ctgccttcgg
2041 tcagcctgct tcctccactc ccacatccac cagtggaagt gtctttggtg ccgcctcaag
2101 taccagtagc tccagttcct tctcatttgg acagtcttct cccaacacag gaggggggct
2161 gtttggccaa agcaacgctc ctgcttttgg gcagagtcct ggctttggac agggaggctc
2221 tgtctttggt ggtacctcag ctgccaccac aacagcagca acctctgggt tcagcttttg
2281 ccaagcttca ggttttgggt ctagtaatac tggttctgtg tttggtcaag cagccagtac
2341 tggtggaata gtctttggcc agcaatcatc ctcttccagt ggtagcgtgt ttgggtctgg
2401 aaacactgga agagggggag gtttcttcag tggccttgga ggaaaaccca gtcaggatgc
2461 agccaacaaa aacccattca gctcggccag tgggggcttt ggatccacag ctacctcaaa
2521 tacctctaac ctatttggaa acagtggggc caagacattt ggtggatttg ccagctcgtc
2581 gtttggagag cagaaaccca ctggcacttt cagctctgga ggaggaagtg tggcatccca
2641 aggctttggg ttttcctctc caaacaaaac aggtggcttc ggtgctgctc cagtgtttgg
2701 cagccctcct acttttgggg gatcccctgg gtttggaggg gtgccagcat tcggttcagc
2761 cccagccttt acaagccctc tgggctcgac gggaggcaaa gtgttcggag agggcactgc
2821 agctgccagc gcaggaggat tcgggtttgg gagcagcagc aacaccacat ccttcggcac
2881 gctcgcgagt cagaatgccc ccactttcgg atcactgtcc caacagactt ctggttttgg
2941 gacccagagt agcggattct ctggttttgg atcaggcaca ggagggttca gctttgggtc
3001 aaataactcg tctgtccagg gttttggtgg ctggcgaagc tgagggcgtg tcagcaggcc
3061 tttcgatccc tgggaccaac cgcatcctca gcttcttccc cgagaaatgc tggagcaggc
3121 tgttcagacc gacgttgcca tcaaaacaca tacacccaga aagaa
//