LOCUS AK302643 3169 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51404 complete cds, highly similar to Netrin
receptor DCC precursor.
ACCESSION AK302643
VERSION AK302643.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3169)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3169
/clone="TESTI4018537"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497267"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 378..3071
/codon_start=1
/note="highly similar to Netrin receptor DCC precursor"
/protein_id="BAG63884.1"
/transl_table=1
/translation="MGDTVLLKCEVIGEPMPTIHWQKNQQDLTPIPGDSRVVVLPSGA
LQISGLQPGDIGIYRCSARNPASSRTGNEAEVRILSDPGLHRQLYFLQRPSNVVAIEG
KDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGMYTCVV
TYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECTVSGKPVPTVNWMKNGDV
VIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQTSAQLIVPKPAIPSSSVL
PSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALNTTQPGSLQ
LTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLQAVSTSPTSI
LITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYKLEGLKKFTEYSLRFLAYN
RYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKI
RHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPEN
DLDESQVPDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDS
KQRYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITDLSTPMLPPVGVQAVA
LTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTTSLSYTATGLKP
NTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREGKPRAVIVSWQPP
LEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFRIQARNSK
GVGPLSDPILFRTLKVEHPDKMANDQDTGVTINLVNEVLLG"
BASE COUNT 905 a 738 c 732 g 794 t
ORIGIN
1 gttccagtga tcaagtggaa gaaagatggc attcatctgg ccttgggaat ggatgaaagg
61 aagcagcaac tttcaaatgg gtctctgctg atacaaaaca tacttcattc cagacaccac
121 aagccagatg agggacttta ccaatgtgag gcatctttag gagattctgg ctcaattatt
181 agtcggacag caaaagttgc agtagcagac taggtgtcat gtgatataac tggacccagg
241 agaatgaccc cacaactgaa agatttttat gaaggatgat ttactattct ccaacgtact
301 gacatttttc tacagcccaa tcattgctgg ggagaccact gaggttcctt tcacagacag
361 aatctgtcac agccttcatg ggagacacag tgctactcaa gtgtgaagtc attggggagc
421 ccatgccaac aatccactgg cagaagaacc aacaagacct gactccaatc ccaggtgact
481 cccgagtggt ggtcttgccc tctggagcat tgcagatcag cggactccaa ccgggggaca
541 ttggaattta ccgatgctca gctcgaaatc cagccagctc aagaacagga aatgaagcag
601 aagtcagaat tttatcagat ccaggactgc atagacagct gtattttctg caaagaccat
661 ccaatgtagt agccattgaa ggaaaagatg ctgtcctgga atgttgtgtt tctggctatc
721 ctccaccaag ttttacctgg ttacgaggcg aggaagtcat ccaactcagg tctaaaaagt
781 attctttatt gggtggaagc aacttgctta tctccaatgt gacagatgat gacagtggaa
841 tgtatacctg tgttgtcaca tataaaaatg agaatattag tgcctctgca gagctcacag
901 tcttggttcc gccatggttt ttaaatcatc cttccaacct gtatgcctat gaaagcatgg
961 atattgagtt tgaatgtaca gtctctggaa agcctgtgcc cactgtgaat tggatgaaga
1021 atggagatgt ggtcattcct agtgattatt ttcagatagt gggaggaagc aacttacgga
1081 tacttggggt ggtgaagtca gatgaaggct tttatcaatg tgtggctgaa aatgaggctg
1141 gaaatgccca gaccagtgca cagctcattg tccctaagcc tgctatccca agctccagtg
1201 tcctcccttc ggctcccaga gatgtggtcc ctgtcttggt ttccagccga tttgtccgtc
1261 tcagctggcg cccacctgca gaagcgaaag ggaacattca aactttcacg gtctttttct
1321 ccagagaagg tgacaacagg gaacgagcat tgaatacaac acagcctggg tcccttcagc
1381 tcactgtggg aaacctgaag ccagaagcca tgtacacctt tcgagttgtg gcttacaatg
1441 aatggggacc gggagagagt tctcaaccca tcaaggtggc cacacagcct gagttgcaag
1501 ttccagggcc agtagaaaac ctgcaagctg tatctacctc acctacctca attcttatta
1561 cctgggaacc ccctgcctat gcaaacggtc cagtccaagg ttacagattg ttctgcactg
1621 aggtgtccac aggaaaagaa cagaatatag aggttgatgg actatcttat aaactggaag
1681 gcctaaaaaa attcaccgaa tatagtcttc gattcttagc ttataatcgc tatggtccgg
1741 gcgtctctac tgatgatata acagtggtaa cactttctga cgtgccaagt gccccgcctc
1801 agaacgtctc cctggaagtg gtcaattcaa gaagtatcaa agttagctgg ctgcctcctc
1861 catcaggaac acaaaatgga tttattaccg gctataaaat tcgacacaga aagacgaccc
1921 gcaggggtga gatggaaaca ctggagccaa acaacctctg gtacctattc acaggactgg
1981 agaaaggaag tcagtacagt ttccaggtgt cagccatgac agtcaatggt actggaccac
2041 cttccaactg gtatactgca gagactccag agaatgatct agatgaatct caagttcctg
2101 atcaaccaag ctctcttcat gtgaggcccc agactaactg catcatcatg agttggactc
2161 ctcccttgaa cccaaacatc gtggtgcgag gttatattat cggttatggc gttgggagcc
2221 cttacgctga gacagtgcgt gtggacagca agcagcgata ttattccatt gagaggttag
2281 agtcaagttc ccattatgta atctccctaa aagcttttaa caatgccgga gaaggagttc
2341 ctctttatga aagtgccacc accaggtcta taaccgatct ctccaccccc atgctcccac
2401 cagtaggtgt acaggctgtg gctcttaccc atgatgctgt gagggtcagc tgggcagaca
2461 actctgtccc taagaaccaa aagacgtctg aggtgcgact ttacaccgtc cggtggagaa
2521 ccagcttttc tgcaagtgca aaatacaagt cagaagacac aacatctcta agttacacag
2581 caacaggcct caaaccaaac acaatgtatg aattctcggt catggtaaca aaaaacagaa
2641 ggtccagtac ttggagcatg actgcacatg ccaccacgta tgaagcagcc cccacctctg
2701 ctcccaagga cttgacagtc attactaggg aagggaagcc tcgtgccgtc attgtgagtt
2761 ggcagcctcc cttggaagcc aatgggaaaa ttactgctta catcttattt tataccttgg
2821 acaagaacat cccaattgat gactggatta tggaaacaat cagtggtgat aggcttactc
2881 atcaaatcat ggatctcaac cttgatacta tgtattactt tcgaattcaa gcacgaaatt
2941 caaaaggagt ggggccactc tctgatccta tcctcttcag gactctgaaa gtggaacacc
3001 ctgacaaaat ggctaatgac caagacactg gcgtgacgat taatcttgtt aatgaagttc
3061 tgcttggctg aggctgcggc tctgataagg aagatgtaaa ttttcttgag aggaaattgt
3121 tttgtctcca ttctgaagga ccaattaaaa tgtcaagctt ctttgtatg
//