LOCUS AK302606 3061 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61740 partial cds, highly similar to Pre-mRNA
cleavage complex 2 protein Pcf11.
ACCESSION AK302606
VERSION AK302606.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3061)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3061
/clone="TESTI4015492"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497230"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 315..>3061
/codon_start=1
/note="highly similar to Pre-mRNA cleavage complex 2
protein Pcf11"
/protein_id="BAH13760.1"
/transl_table=1
/translation="MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILA
EENLPFAKEIVSLIEAQTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFIC
VFEKVDENTRKSLFKLRSTWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIH
VNPKFLNKSPEEPSTPGTVVSSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLEL
QQKKLELELEQAKAQLAVSLSVQQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQS
EKSRPGPSLQIQDLKGTNRDPRLNRISQHSHGKDQSHRKEFLMNTLNQSDTKTSKTIP
SEKLNSSKQEKSKSGEKITKKELDQLDSKSKSKSKSPSPLKNKLSHTKDLKNQESESM
RLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDEHMKSSEHRLAGSRNKII
NGIVQKQDTITEESEKQGTKPGRSSTRKRSRSRSPKSRSPIIHSPKRRDRRSPKRRQR
SMSPTSTPKAGKIRQSGAKQSHMEEFTPPSREDRNAKRSTKQDIRDPRRMKKTEEERP
QETTNQHSTKSGTEPKENVENWQSSKSAKRWKSGWEENKSLQQVDEHSKPPHLRHRES
WSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLASKRELLQKTSERLASGEITQDDF
LVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKKPLLSDAELTYYEHKAKLKRTQ
VQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASRNSGAQFDRKEQFSERARR
LSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFNDRFPLKRPRYEDSDKPF
VDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIFEGPNKLSPRIDGP
PT"
BASE COUNT 1036 a 659 c 687 g 679 t
ORIGIN
1 ttttcgcacg acgcagcggt tgggaacaca gacattttcg gagctggagc cgccactgcc
61 gccgccattt tgtgtctgtg gagaaagaag cttctgtggc ggctggaagt ggacggagat
121 cacccgcgag acggcggcgt ttcatacccg aggttccccc tgtgtcgtcc cccatccccc
181 ctccgcggtc agcatgtggt gaagccggag ccgcgagaga gccggggaga ggaagaggag
241 tcggaaggga ggcggggtat ccagagcggc ttcagcttca gctgcagcgg acctcggagg
301 ggggccgcgg cgcaatgtca gagcagacgc cggccgaggc cggtgctgcg ggggcccggg
361 aggacgcctg tcgggattat cagtcatcgc tcgaagacct gaccttcaat agcaagccgc
421 acatcaatat gctgaccatt ctagccgagg agaacctgcc cttcgccaag gagatcgtct
481 ctctcatcga ggcccaaacc gccaaggctc cttcctcaga gaagcttcct gttatgtacc
541 ttatggattc tattgtgaaa aacgttggaa gagagtatct cactgccttt actaaaaatc
601 tagttgcaac atttatttgt gtgtttgaaa aggtggatga aaatactagg aaaagtttat
661 ttaagttacg ttctacatgg gatgaaatat tccctttgaa gaaactttat gccctggatg
721 tcagagtcaa ttcattagat cctgcttggc ctattaaacc tctacccccc aatgtgaata
781 cgtctagcat ccatgtgaat cctaaatttt taaataaatc gcccgaggag ccttcaacac
841 ctggtacagt ggtcagttcc cctagcatct ccactcctcc aattgttcct gatatacaaa
901 agaatcttac acaagaacaa ctaataaggc agcagttact ggcaaagcaa aaacagttgt
961 tagaacttca gcagaaaaag ctggagcttg agctagagca agctaaggca cagttggcag
1021 tttctcttag tgttcagcag gaaacatcca atttaggtcc tggatctgca ccatccaaat
1081 tacatgtttc acagattccc cctatggcag ttaaagctcc tcatcaggtt cctgtgcaat
1141 ctgagaaaag ccgtccagga ccatccttac aaattcagga tttaaaagga actaaccggg
1201 atcctcgtct gaacaggata agccaacatt ctcatggaaa agatcagagt cacaggaaag
1261 aatttctaat gaacacatta aaccagtctg atactaagac aagtaaaact ataccctctg
1321 aaaaactaaa ttcatccaag caagaaaaaa gtaaatcagg tgaaaaaata accaagaaag
1381 aacttgacca attagattct aaatcgaaat cgaaatcgaa atcaccctca cctttgaaaa
1441 acaaattatc tcacacaaaa gacttgaaaa atcaagaatc ggaaagtatg aggttgtctg
1501 atatgaacaa gagagatcca agattaaaaa aacatcttca ggataagacc gatggcaaag
1561 atgatgatgt gaaagagaag agaaaaactg cagaaaaaaa ggataaagat gagcacatga
1621 agtcatccga acacagactg gctggaagta gaaataaaat cataaatggc attgtacaaa
1681 aacaggatac aataacagaa gagtcagaaa aacaggggac aaaaccaggg agatcgagta
1741 ctagaaagcg atcaagatct cgatcaccca agtctaggtc accaattata cattccccaa
1801 agagaagaga taggcggtca cccaaacgaa ggcaaagaag tatgtctcca acatcgacac
1861 ctaaagctgg aaagattcgc caatctggag ctaagcagtc acatatggaa gagtttacac
1921 caccttctag ggaagacaga aatgctaaga gaagtactaa acaggatatt cgggatccaa
1981 ggcgaatgaa aaagactgaa gaggagcgac cacaagaaac tacaaatcag cattctacaa
2041 agtcaggcac tgaaccaaag gagaatgtag aaaactggca aagttccaag tctgccaaaa
2101 gatggaaatc tggttgggaa gaaaataaaa gcttacaaca ggttgatgaa catagtaaac
2161 ctcctcatct gaggcatagg gagagctggt caagcactaa aggaatttta tcacctcgag
2221 ccccaaagca gcaacagcat cgattaagtg tagatgccaa tcttcagatt cctaaagagt
2281 taactcttgc aagcaaaaga gaattacttc aaaagacgag tgaacgttta gcatctggtg
2341 aaattacaca ggatgacttc cttgttgttg tgcatcaaat tcgacagcta tttcagtatc
2401 aagaaggtaa acatagatgc aatgtacggg atagtcctac agaagaaaat aaaggtggat
2461 taaaaaagaa acctctctta tctgatgctg aattaaccta ctatgaacat aaagcaaaac
2521 tgaaaaggac acaggttcag cattcatttc caagacttga tctcttagat cctgatattt
2581 ttgactaccc tttgactgat gccttgttgt ctggaataga atgtgagcca tccaaaagta
2641 aacatgcaag taggaatagt ggagcacagt ttgacagaaa agaacaattt agtgaaagag
2701 caagacgtct ttctcctata tctgggagtc gtacttatgc tgagaatctt tcaccccatg
2761 agggccggag aagacatgac gagcaagtct ctgctaaagg tgtgcgagaa gagcagagat
2821 ctccattcaa tgatcgtttt ccacttaagc gacctcgata tgaagattca gataaaccat
2881 ttgtagatag tccagcatca agattcgccg gcctggatac aaatcagcga cttacagctt
2941 tagctgaaga cagaccgtta tttgatggac ctagtaggcc atcagtagca agagatggcc
3001 caacgaagat gatttttgaa ggacccaata aattaagccc tcgaattgat ggacctccca
3061 c
//