LOCUS AK302581 3550 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56410 complete cds, highly similar to Homo
sapiens OTU domain containing 4 (OTUD4), transcript variant 1,
mRNA.
ACCESSION AK302581
VERSION AK302581.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3550)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3550
/clone="TESTI4014193"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497205"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 101..3250
/codon_start=1
/note="highly similar to Homo sapiens OTU domain
containing 4 (OTUD4), transcript variant 1, mRNA"
/protein_id="BAG63836.1"
/transl_table=1
/translation="MACIHYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISAL
SLMYRKDFIIYREPNVSPSQVTENNFPEKVLLCFSNGNHYDIVYPIKYKESSAMCQSL
LYELLYEKVFKTDVSKIVMELDTLEVADEDNSEISDSEDDSCKSKTAAAAADVNGFKP
LSGNEQLKNNGNSTSLPLSRKVLKSLNPAVYRNVEYEIWLKSKQAQQKRDYSIAAGLQ
YEVGDKCQVRLDHNGKFLNADVQGIHSENGPVLVEELGKKHTSKNLKAPPPESWNTVS
GKKMKKPSTSGQNFHSDVDYRGPKNPSKPIKAPSALPPRLQHPSGVRQHAFSSHSSGS
QSQKFSSEHKNLSRTPSQIIRKPDRERVEDFDHTSRESNYFGLSPEERREKQAIEESR
LLYEIQNRDEQAFPALSSSSVNQSASQSSNPCVQRKSSHVGDRKGSRRRMDTEERKDK
DSIHGHSQLDKRPEPSTLENITDDKYATVSSPSKSKKLECPSPAEQKPAEHVSLSNPA
PLLVSPEVHLTPAVPSLPATVPAWPSEPTTFGPTGVPAPIPVLSVTQTLTTGPDSAVS
QAHLTPSPVPVSIQAVNQPLMPLPQTLSLYQDPLYPGFPCNEKGDRAIVPPYSLCQTG
EDLPKDKNILRFFFNLGVKAYSCPMWAPHSYLYPLHQAYLAACRMYPKVPVPVYPHNP
WFQEAPAAQNESDCTCTDAHFPMQTEASVNGQMPQPEIGPPTFSSPLVIPPSQVSESH
GQLSYQADLESETPGQLLHADYEESLSGKNMFPQPSFGPNPFLGPVPIAPPFFPHVWY
GYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDLSKDCGSVSTVDEFPEARGEHVH
SLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEGKAHPPTQILNRERETVPVEL
EPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRPKEESSEDENEVSNILRSG
RSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSRSRDEGYQYHRNVRGRP
FRGDRRRSGMGDGHRGQHT"
BASE COUNT 1085 a 755 c 787 g 923 t
ORIGIN
1 gaaaggtgca aattgaaact cgaaagcccg caaattaacg gggtgtctct ctcctgatga
61 agaggtattg cactctcagt ctcgccatgt tgaagtcaga atggcctgta ttcactatct
121 tcgagagaac agagagaaat ttgaagcgtt tatagaagga tcatttgaag aatatttaaa
181 gcgtttggaa aatccacagg aatgggtagg acaagtggaa ataagtgccc tttctcttat
241 gtacaggaaa gattttataa tttatcggga accaaatgtt tctccttcac aagtaacaga
301 aaataatttt cctgaaaagg tgttactgtg tttttcaaat ggaaatcatt atgatattgt
361 gtatcccata aagtataaag aaagctctgc tatgtgtcag tctctccttt atgaattgct
421 gtatgagaag gtatttaaaa ctgatgttag taaaattgtg atggaactag acacgttgga
481 agtagctgat gaagataaca gtgaaatatc agattcagag gatgacagtt gcaagagtaa
541 gactgctgct gctgctgctg atgtgaatgg atttaaacct ttgtcaggca atgagcagct
601 gaagaacaat gggaactcta ctagcctgcc tttgtctaga aaggttctta agtcactcaa
661 tcctgcagtc tatagaaatg tggaatatga aatttggctg aagtctaaac aagctcagca
721 aaaacgtgat tattccattg ctgctggctt acaatatgaa gttggagaca aatgtcaagt
781 taggttggat cacaatggaa aatttttgaa tgcagatgtt caaggaattc attctgagaa
841 tggaccagtt ttggttgaag aactgggaaa gaagcacaca tcaaagaacc tcaaggcacc
901 tcccccagaa agctggaaca cagtgtcagg gaagaagatg aaaaaacctt ccacttctgg
961 acaaaatttc cattctgatg tggattacag agggccaaag aatccaagca agccaataaa
1021 agccccatca gcactacctc ctcgactgca gcatccttca ggagtaagac aacatgcgtt
1081 ctctagtcat tcttcagggt cacagtctca gaaattctcc agtgagcaca aaaatcttag
1141 ccggacacct tcacagatca taagaaaacc tgatcgtgaa agagttgagg attttgatca
1201 cacaagtcga gaatctaact atttcggcct ttccccagaa gagcgcagag agaagcaagc
1261 tatagaagaa tcccgtttac tctatgagat tcagaacaga gatgaacagg ctttcccagc
1321 cctttccagc tcatcagtca atcagtcagc ttctcagagt agcaatccat gtgtccagag
1381 aaaatcatca catgtaggtg atagaaaagg aagcaggcgg agaatggata cagaagaacg
1441 aaaagacaaa gactctattc atggacatag tcagttggat aaaagacccg aaccaagcac
1501 attggagaat attactgatg ataaatatgc aacagtttca tcaccatcaa agtcaaagaa
1561 gttagagtgc ccttctcctg cggaacaaaa gccagcagaa catgtgtctt tgtcaaatcc
1621 agctcccctt ctagtttctc cagaggtaca tctaactcct gcggtgcctt ctttaccagc
1681 cactgtgcca gcctggccaa gtgaacctac aacttttgga ccaacaggtg tccctgctcc
1741 aattcccgtt ttgtcagtga cacagacttt gaccactgga cctgattcag ctgtatccca
1801 agctcattta acaccctctc cagttcctgt gtcaatacag gcagttaacc agcccttgat
1861 gcctttgcct cagacattga gcctttatca agacccactc tatcctgggt ttccttgtaa
1921 tgaaaaggga gatcgagcca ttgtaccacc ttattcactg tgtcagactg gggaggacct
1981 acctaaagat aagaatattc ttcgattctt cttcaatctt ggtgtgaagg catacagttg
2041 tcctatgtgg gccccacatt cttacctgta ccctctgcac caggcctacc tggcagcctg
2101 caggatgtac ccaaaggtcc ctgtccctgt ttatcctcat aatccctggt tccaagaggc
2161 tcctgctgct cagaatgaaa gtgattgtac ctgtactgat gcccactttc ctatgcagac
2221 tgaggccagt gttaatggtc aaatgccaca gccagagatt ggaccgccga cattttcttc
2281 acctctggtt atccctccat ctcaggtgtc tgaaagtcat ggacaattgt cttaccaggc
2341 tgatcttgaa tctgagaccc ctgggcagct tctgcatgct gattatgaag agtcactaag
2401 tggcaagaat atgttccccc agccatcttt tggacccaat ccattcttag gcccagttcc
2461 tattgcacct cctttctttc ctcatgtttg gtatgggtac ccttttcagg gattcataga
2521 aaatccagta atgaggcaga atattgtcct gccctctgat gaaaaaggag aattggatct
2581 gtctctggaa aatctggatc tgtctaaaga ttgtggttca gtttcaacag tagatgagtt
2641 tccagaagcc aggggtgaac atgtacattc tctccctgaa gcaagtgtga gcagtaagcc
2701 ggacgaaggc cggacagagc aatcttccca gacacgaaag gcagatacgg cattggcttc
2761 catccctcct gtagcagagg gaaaggctca tcctcccact cagattctaa acagagagag
2821 agaaactgtg cctgttgaac ttgaacctaa aaggaccatt caaagcctga aagaaaaaac
2881 agaaaaagta aaagatccta agactgctgc tgatgtggtc agccctgggg ccaactctgt
2941 tgatagcaga gtgcaaagac caaaagaaga gagttcagaa gatgaaaatg aagtgtctaa
3001 tattttgaga agtggtagat ccaagcagtt ctataatcaa acttatggaa gcaggaagta
3061 caaaagtgat tggggctatt ctggtagggg tggatatcaa catgtgagaa gtgaggagtc
3121 ctggaaagga cagccaagca gaagtcggga tgaaggttat cagtaccatc gaaatgtcag
3181 agggcgacca tttaggggag ataggaggag atcagggatg ggagatggcc ataggggaca
3241 gcacacttga tggttgttgc cgaagtattt tctaacagaa actcttaggt ggaatgtttc
3301 tgaaggcttt aaaaaaaata caataaagta aaaaccgcag ttggaactct ttcctctccc
3361 cagcccccct taccttcact cccatactgg acaagacatt ttggacatga gttcaagggg
3421 gcaggttaat tcctggcatt gccagttttc ttcattcaga atctgtttgt tgatcaagtg
3481 actgtccccg taaaaagtag aagataagtt tgttaaagta ttttttataa acagcttaat
3541 ataaaacatt
//