LOCUS AK302568 3662 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56473 complete cds, highly similar to Zinc
finger and BTB domain-containing protein 38.
ACCESSION AK302568
VERSION AK302568.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3662)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3662
/clone="TESTI4013499"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497192"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 48..3638
/codon_start=1
/note="highly similar to Zinc finger and BTB
domain-containing protein 38"
/protein_id="BAG63830.1"
/transl_table=1
/translation="MMTVMSLSRDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTK
FKAHSNVLAASSLYFKNIFWSHTICISSHVLELDDLKAEVFTEILNYIYSSTVVVKRQ
ETVTDLAAAGKKLGISFLEDLTDRNFSNSPGPYVFCITEKGVVKEEKNEKRHEEPAIT
NGPRITNAFSIIETENSNNMFSPLDLRASFKKVSDSMRTASLCLERTDVCHEAEPVRT
LAEHSYAVSSVAEAYRSQPVREHDGSSPGNTGKENCEALAAKPKTCRKPKTFSIPQDS
DSATENIPPPPVSNLEVNQERSPQAAAVLTRSKSPNNEGDVHFAREDENQSSDVPGPP
AAEVPPLVYNCSCCSKAFDSSTLLSAHMQLHKPTQEPLVCKYCNKQFTTLNRLDRHEQ
ICMRSSHMPIPGGNQRFLENYPTIGQNGGSFTGPEPLLSENRIGEFSSTGSTLPDTDH
MVKFVNGQMLYSCVVCKRSYVTLSSLRRHANVHSWRRTYPCHYCNKVFALAEYRTRHE
IWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRLSISKKTANGGLKPSVYPYKL
YRLLPMKCKRAPYKSYRNSSYENARENSQMNESAPGTYVVQNPHSSELPTLNFQDTVN
TLTNSPAIPLETSACQDIPTSANVQNAEGTKWGEEALKMDLDNNFYSTEVSVSSTENA
VSSDLRAGDVPVLSLSNSSENAASVISYSGSAPSVIVHSSQFSSVIMHSNAIAAMTSS
NHRAFSDPAVSQSLKDDSKPEPDKVGRFASRPKSIKEKKKTTSHTRGEIPEESNYVAD
PGGSLSKTTNIAEETSKIETYIAKPALPGTSTNSNVAPLCQITVKIGNEAIVKRHILG
SKLFYKRGRRPKYQMQEEPLPQGNDPEPSGDSPLGLCQSECMEMSEVLDDASDQDSTD
KPWRPYYNYKPKKKSRQLKKMRKVNWRKEHGNRSPSHKCKYPAELDCAVGKAPQDKPF
EEEETKEMPKLQCELCDGDKAVGAGNQGRPHRHLTSRPYACELCAKQFQSPSTLKMHM
RCHTGEKPYQCKTCGRCFSVQGNLQKHERIHLGLKEFVCQYCNKAFTLNETLKIHERI
HTGEKRYHCQFCFQRFLYLSTKRNHEQRHIREHNGKGYACFQCPKICKTAAALGMHQK
KHLFKSPSQQEKIGDVCHENSNPLENQHFIGSEDNDQKDNIQTGVENVVL"
BASE COUNT 1160 a 864 c 813 g 825 t
ORIGIN
1 agttctcaga caggctgccc agaggggctc cagcataagc aggagacatg atgacagtca
61 tgtccctttc cagggacctc aaggacgact ttcacagtga cacggtactc tccatcttaa
121 atgagcagcg cattcggggc attttatgcg atgtcactat cattgtggaa gataccaaat
181 ttaaagccca tagcaatgtt ctggcagctt caagcctgta ttttaaaaat atcttttgga
241 gccatacaat ctgtatttcc agccacgtcc tggagctgga cgatctcaaa gctgaagtgt
301 ttactgaaat acttaattat atctacagtt ccacagtcgt tgtcaagaga caggaaacag
361 tcactgatct cgcagctgca ggaaaaaagc tgggaatatc gttcttggaa gaccttactg
421 atcgcaactt ctcaaattcc ccgggtccct atgtattctg tattactgaa aagggagtgg
481 ttaaagaaga aaaaaatgaa aaaaggcatg aagaaccagc catcactaat gggccaagga
541 tcacaaatgc attttccatc atcgaaacag aaaatagtaa taacatgttt tccccgctgg
601 acttgagggc aagtttcaaa aaggtctccg actccatgag aacagctagc ctttgcctgg
661 agaggacgga cgtctgccac gaggcagagc ctgtccgcac acttgccgag cactcatacg
721 ctgtttcttc cgtagctgaa gcttacagaa gtcagcctgt acgtgaacat gatggcagtt
781 cacctggtaa cacagggaaa gaaaattgtg aagcccttgc agcgaaaccg aaaacatgcc
841 ggaagccaaa gacattctcc ataccacagg attcggattc agccacagaa aatataccac
901 cccctccagt atccaactta gaggttaatc aagaaagaag tccacaagca gctgctgttc
961 tcactcgttc aaaatctcca aacaatgaag gagatgtcca ttttgccagg gaagatgaaa
1021 atcaatcttc tgatgttccc gggccgccag ccgcagaggt tccacctctg gtgtacaatt
1081 gtagctgctg ttccaaagcc tttgacagca gcactctgct cagtgcccac atgcagcttc
1141 acaagccaac ccaggagcct ttagtgtgca agtattgcaa caaacaattc accaccctga
1201 acaggttgga tcggcatgaa cagatctgca tgaggtcaag ccacatgccc attcctggag
1261 gaaaccaacg ctttttagaa aactatccta ccattggaca aaatggaggt tcattcacag
1321 gtccagaacc tttattatct gaaaatagga ttggtgaatt ttccagtacc ggaagtactt
1381 tgccagacac ggaccacatg gttaaatttg ttaatgggca aatgctctac agttgcgttg
1441 tgtgcaaacg tagttatgtg accttatcta gcctccgaag acatgcaaat gttcactcct
1501 ggagaagaac atatccttgc cattactgca acaaagtatt tgcattggct gagtacagga
1561 caaggcatga aatttggcat acgggagaaa gacgatatca gtgcattttc tgtcttgaaa
1621 ctttcatgac ctactatata ctcaaaaatc atcagaagtc tttccatgcc atcgatcata
1681 gactttccat cagtaaaaaa acagcaaatg gaggcttgaa gcctagtgtc tatccgtata
1741 aactttatag gctactgcct atgaaatgca agagagcccc ttataagagc taccgaaatt
1801 cttcctatga aaatgcacga gaaaacagtc aaatgaatga gtctgcacct ggtacctatg
1861 ttgttcagaa tccacacagc tctgaattac caacgctgaa tttccaagat actgtaaaca
1921 ccctgaccaa cagtccagcc atcccattgg aaacatctgc atgtcaggac atacccactt
1981 ctgccaatgt acaaaatgca gagggtacca aatggggaga ggaggcattg aaaatggatc
2041 ttgacaataa cttttattca actgaggtgt cagtttcttc cactgaaaat gctgtcagtt
2101 ctgacctccg ggcaggggat gtacctgttt tatctttgag taatagcagt gagaatgccg
2161 cctctgtgat cagctacagt ggctctgcac cctcggtcat tgtacacagc agccagtttt
2221 catcggtgat catgcacagc aatgccattg ctgccatgac cagcagcaac cacagagcct
2281 tttcagaccc agctgtcagt cagtccctga aagatgacag taagcccgag ccagataaag
2341 tgggtaggtt tgcaagcaga cccaaaagca ttaaggagaa aaagaaaact acatcacata
2401 ccaggggaga aataccggag gagtcaaact atgttgctga tcctggagga tcactgagca
2461 aaaccacaaa tattgctgaa gaaaccagca aaattgaaac ctacattgca aaacctgctc
2521 tgccgggaac ctccacaaat agtaatgttg cacccctttg ccaaataaca gtgaaaattg
2581 gaaacgaagc cattgtgaaa aggcacattc taggatctaa attgttttat aaaagaggga
2641 gaagacccaa gtatcagatg caggaggagc ctttgccaca ggggaatgac ccagaaccca
2701 gtggagacag cccactcggg ctttgccaat ccgagtgcat ggagatgagt gaagtgctcg
2761 atgacgcaag tgaccaggat tccactgaca aaccgtggcg cccttactac aactacaaac
2821 ccaaaaagaa atccagacag ttgaaaaaaa tgaggaaagt caactggagg aaggagcacg
2881 gaaacaggag cccgagccat aaatgtaaat acccagcaga actggattgc gccgtgggga
2941 aggctcctca ggataaaccc tttgaggaag aagaaactaa agagatgccc aagctgcagt
3001 gtgaactctg tgatggagac aaagcagtgg gggctggaaa ccaaggaagg ccccaccgac
3061 atcttacttc tcggccatat gcctgcgagc tctgcgccaa gcagttccag agcccttcca
3121 cactcaaaat gcacatgaga tgtcacaccg gggagaagcc ataccagtgc aagacctgcg
3181 gacggtgctt ttcggtgcaa ggaaacttac agaaacatga acgcatccac ctgggcttga
3241 aggagttcgt ctgtcagtat tgcaacaagg cattcacctt gaatgagacc ctcaaaatcc
3301 atgaaagaat ccatactgga gaaaagcgtt accactgtca gttctgcttt cagagatttt
3361 tgtatctctc caccaaaagg aatcacgagc agaggcatat tcgggagcat aatgggaagg
3421 gctatgcctg cttccagtgc cccaaaattt gcaaaacagc tgctgccctt ggaatgcacc
3481 aaaagaaaca cttattcaaa agcccaagtc agcaggagaa aataggtgac gtgtgccacg
3541 aaaactcaaa tcccttggag aatcaacatt tcattggttc agaagacaat gaccaaaagg
3601 ataacataca aaccggtgtg gaaaatgttg tcctttgagt ggcaagaatt agaaaaatct
3661 tc
//