LOCUS AK302500 3560 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50916 complete cds, highly similar to Rho
guanine nucleotide exchange factor 11.
ACCESSION AK302500
VERSION AK302500.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3560)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3560
/clone="TESTI4009096"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497124"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 390..3206
/codon_start=1
/note="highly similar to Rho guanine nucleotide exchange
factor 11"
/protein_id="BAH13728.1"
/transl_table=1
/translation="MFRRRTCGTEASLRWSHSSRSEIRLGRSESLKGREEMKRSRKAE
NVPRSRSDVDMDAAAEATRLHQSASSSTSSLSTRSLENPTPPFTPKMGRRSIESPSLG
FCTDTLLPHLLEDDLGQLSDLEPEPDAQNWQHTVGKDVVAGLTQREIDRQEVINELFV
TEASHLRTLRVLDLIFYQRMKKENLMPREELARLFPNLPELIEIHNSWCEAMKKLREE
GPIIKEISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEA
ESHPQCRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILK
YVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSLDLTTRKMIHEGPLTWRI
SKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIR
SVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNATRHPGAAPMPV
HPPPPGPREPAQQGPTPSRVELDDSDVFHGEPEPEELPGGTGSQQRVQGKHQVLLEDP
EQEGSAEEEELGVLPCPPTSLDGENRGIRTRNPIHLAFPGPLFMEGLADSALEDVENL
RHLILWSLLPGHTMETQAAQEPEDDLTPTPSVISVTSHPWDPGSPGQAPPGGEGDNTQ
LAGLEGERPEQEDMGLCSLEHLPPRTRNSGIWESPELDRNLAEDASSTEAAGGYKVVR
KAEVAGSKVVPALPESGQSEPGPPEVEGGTKATGNCFYVSMPSGPPDSSTDHSEAPMS
PPQPDSLPAGQTEPQPQLQGGNDDPRRPSRSPPSLALRDVGMIFRTIEQLTLKLNRLK
DMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDGSLSPPAKEPLASDSRNSHELG
PCPEDGSDAPLEDSTADAAASPGP"
BASE COUNT 846 a 1071 c 995 g 648 t
ORIGIN
1 gaatatagtg actccacttt cctcttaaga cctcttaaaa gaggttcgcc tcaggcagag
61 ttaaaggtgg gagctgaccc gttccaaagc agaggcaacg tgaactggcc actaggggca
121 gggagctggg accttgtgtt ccctgttgag ggacgatgat gtctaccacc ttcttgacag
181 aagcatggtg tctcaggcct ctggacacac tacaactcag agtctgttag ccccagattt
241 catcttcctg ttaggatccc ttcctaatag ctccagagga agatgactgt ccatccatca
301 ggctaggctg gggagagagg aggagtttgt agagcagcaa aaatagtctg tcattgagaa
361 gcttccactg ccatccagct gctttggcca tgttcaggag gagaacctgt ggcacggagg
421 catctttgag atggagccac agttcacgct cagagattcg cctgggccgc tctgaaagcc
481 tcaagggccg ggaagagatg aaacggtctc gaaaggcaga gaacgtgccc cgctctcgca
541 gtgatgttga catggatgct gctgcggagg ctactcgcct gcaccagtca gcctcgtcct
601 ctacctccag cctctccacc aggtctcttg agaacccaac ccctccattc actcccaaaa
661 tgggccgcag gagcattgag tcccccagtt tggggttctg cacagatacc ctccttcccc
721 acctcctaga ggatgatctg ggccagctgt ctgacctgga gccagagcca gatgcccaaa
781 attggcagca tacagtgggc aaggatgtgg tggctgggct aacccagcgg gagattgacc
841 ggcaagaggt catcaatgag ctgtttgtga ctgaagcttc ccacctgcgc acactccggg
901 tcctggacct gatcttctac cagcgaatga agaaggagaa cctgatgccc cgggaggagc
961 tggcccggct cttcccgaac ctgcctgaac tcatagagat tcacaattcc tggtgtgaag
1021 ccatgaagaa gctccgggag gaaggcccta tcatcaaaga gatcagtgac ctcatgctgg
1081 cccggtttga tggccctgcc cgagaggaac tccagcaagt ggctgcacag ttctgttcct
1141 atcagtcaat agccctagag ctaatcaaga ccaagcaacg caaggagagt cgattccagc
1201 tcttcatgca ggaggctgag agccaccctc agtgtcggcg gctgcagctg agagacctca
1261 tcatctctga gatgcagcgg ctcaccaagt acccgctgct gctggagagc atcatcaagc
1321 acacagaggg tggcacctct gagcatgaga agctgtgccg ggcccgggac cagtgccggg
1381 agattctcaa gtatgtgaat gaagcggtaa aacaaacaga gaaccgccac cgtttagagg
1441 gctaccagaa acgcctggat gccaccgccc tggagagggc cagcaacccc ctggcagcag
1501 agttcaagag cctggatctt acaaccagaa aaatgatcca tgagggaccc ctgacctgga
1561 ggatcagcaa ggataagacc ttggacctcc acgtgctgct gctggaggac ctcctagtgc
1621 tgctacagaa acaggatgag aagctattgc tgaagtgcca cagcaagact gctgtgggct
1681 cctcagacag caagcagacc ttcagccccg tgctcaagct caatgctgtg ctcatccgct
1741 ctgtggccac agataaacgg gccttcttca tcatctgcac ctccaagctg ggcccacccc
1801 agatctatga gctggttgca ttgacgtcat cagacaagaa cacatggatg gagctcttag
1861 aagaggccgt gcggaatgcc accaggcacc ccggagctgc cccaatgccc gtccatcctc
1921 cacccccagg tccccgggag ccagcccagc agggccccac acccagcagg gtagaactgg
1981 atgactcaga cgtgttccat ggtgaacctg aacctgagga gctgcctgga ggcactgggt
2041 cccagcagag ggtccaaggg aagcaccagg tcctgctaga ggaccctgag caggagggca
2101 gtgcagagga agaggaactg ggtgtcctgc cttgccctcc cacatccctg gatggagaga
2161 acaggggcat caggacaagg aaccccatcc acttggcctt cccaggccct ctgttcatgg
2221 aagggctcgc tgactccgct ctggaagatg tggagaatct gcgacatctg atcctgtgga
2281 gcctgctgcc aggtcacacc atggaaactc aggctgccca ggagcccgag gacgacctga
2341 cacccacacc ttctgtcatc agcgtcacct ctcacccctg ggacccaggc tccccagggc
2401 aagcgccccc tgggggtgaa ggggacaaca cccagcttgc agggctggag ggggaacggc
2461 cagagcagga agacatgggt ctctgttctc tggaacacct acccccaagg accagaaatt
2521 ctgggatatg ggagtctcca gaactggaca ggaatctggc tgaagatgct tcaagcacag
2581 aggcagcagg aggttacaaa gttgtgagaa aagctgaggt ggcaggcagc aaggttgtcc
2641 ctgcactacc agagagtggc cagtcagagc ctgggccacc tgaagtggaa ggcggaacaa
2701 aggctacggg gaactgcttt tatgtcagca tgccatcagg acccccggac tcaagcaccg
2761 accactcaga ggcacccatg agcccccctc agcctgacag cctccctgca gggcagacag
2821 agcctcagcc tcagctgcag ggaggcaacg atgatccaag acgccccagc cgctctcctc
2881 caagcctggc cctcagggac gtgggcatga tcttccgtac cattgagcag ctcactctca
2941 agctcaacag gctcaaggat atggagctgg cccacagaga gctgctcaag tcccttgggg
3001 gagagtcatc tggtggcacc acgcctgtgg gcagtttcca cacagaagca gctagatgga
3061 cagatggctc cctctcacct cccgctaagg agcccctagc ttctgactcc aggaacagcc
3121 atgaactggg gccctgccct gaggatggct ctgacgcccc cctggaagac agcacagcag
3181 acgcagccgc gtcaccagga ccataaccgt acaaaccacc aaatcctctg cgtccccact
3241 cctccttcag ggactggcct gagaccgggg cacagggtag gggggatccc aacactcctc
3301 cctgtggagg aggcagttag ggaaactagg atccagccaa ggcccggggg gagacccgca
3361 tgttgcttgg tctgctcaag tcggagtcag gtttcagtgt cttttccctc cctcagccca
3421 accctccaag gcctcatgtc tcctaagcat gctgactgca tccgaaaggc ccccactcac
3481 catggtctgc cctcacccca catatgtgtg tacacgcgca cgcctgtatg tgcgctgccc
3541 tcagacatgc aagtgaaagg
//