LOCUS AK302493 1997 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55856 complete cds, highly similar to Rho
guanine nucleotide exchange factor 3.
ACCESSION AK302493
VERSION AK302493.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1997)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1997
/clone="TESTI4008506"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497117"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 111..1787
/codon_start=1
/note="highly similar to Rho guanine nucleotide exchange
factor 3"
/protein_id="BAH13724.1"
/transl_table=1
/translation="MDSSTAMNQCSCRGMEENKERPKRQRQNNFPMFPSPKAWNFRGR
KRKQSTQDEDAVSLCSLDISEPSNKRVKPLSRVTSLANLIPPVKATPLKRFSQTLQRS
ISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQMLTSKEIKRQEAIF
ELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEELLSQLRD
VRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRVQDFLQRCLES
PFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINIIQGIVAEIN
TKTGESECRYYKERLLYLEEGQKDSLIDSSRVVCCHGELKNNRGVKLHVFLFQEVLVI
TRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFFRVSF
KNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGSRE
LQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV"
BASE COUNT 559 a 515 c 488 g 435 t
ORIGIN
1 agcccagggg agccgccgcc gcagccgccg ccgccgcggt gagttttcca gcctggagag
61 gccgaaccag cgcgggggtc gaggagacct gagcctgcca tactgagtct atggacagtt
121 ccacagcaat gaatcaatgc agctgtagag gaatggaaga aaacaaggaa aggcctaaac
181 ggcagcggca aaacaacttt cccatgtttc cctctcctaa agcctggaat ttcagagggc
241 gaaaacggaa acagagcacc caagatgaag atgctgttag cctttgcagt ctcgacataa
301 gtgagcctag taataaacgg gtcaaacccc tttcccgagt cacgtcgcta gcaaacctca
361 tcccgcccgt gaaggccacg ccattaaagc gcttcagtca aaccctgcag cgctccatta
421 gcttccgcag tgagagccgc cctgacatcc tcgccccccg accctggtcc agaaatgccg
481 ccccctcgag cacgaaacgg agagatagca agctgtggag tgagaccttc gatgtgtgcg
541 tcaatcagat gcttacatcc aaggaaatca aacgtcagga ggcgatcttt gagctttccc
601 aaggagaaga agacttgata gaagacttga aattagcaaa aaaggcctat catgacccca
661 tgctgaaact ctccataatg acagaacaag agttgaatca aatttttgga acactggact
721 ctctaattcc tctacatgaa gagctcctta gtcagcttcg agatgttagg aagcctgatg
781 gctcgactga acatgttggt cccatcctcg tgggctggct cccttgcctc agctcctatg
841 atagctactg cagcaatcaa gtagccgcca aagctctgct ggaccacaaa aagcaagatc
901 accgagtcca ggatttccta cagcgatgtt tagaatcccc ctttagccgc aaactagatc
961 tctggaattt cctcgatatt ccaagaagcc gcctggtaaa ataccctctg cttctccgag
1021 aaatcttgag gcacacacca aatgataatc cagatcagca gcacttggaa gaagctataa
1081 atatcattca gggaattgtg gcagaaatca acaccaagac tggtgaatct gaatgccgct
1141 attataaaga gcggcttctt tacttggaag aaggccagaa agactccctg atcgacagct
1201 ctcgagtcgt gtgttgtcat ggtgaactga agaacaatcg gggcgtgaaa ctgcatgttt
1261 tcctgttcca agaagtgctt gtgatcactc gagccgtcac ccacaatgag cagctttgct
1321 accagctgta ccgtcagcca atccccgtga aagacctcct gctggaagac ctccaggatg
1381 gagaagtgag gctgggtggc tccctgcgag gggcattcag caacaatgag agaattaaaa
1441 acttcttcag agtcagtttc aaaaatggat cccaaagtca gacccactcg ctacaagcca
1501 atgacacttt caacaaacag cagtggctta actgtattcg tcaagccaaa gaaacagttt
1561 tgtgtgctgc cgggcaagct ggggtgcttg actccgaggg atcgttccta aatcccacca
1621 ccgggagcag agagctacag ggagaaacaa aacttgagca gatggaccaa tcggacagtg
1681 agtcagactg tagtatggac acgagtgagg tcagcctcga ctgtgagcgc atggaacaga
1741 cagactcttc ctgtgggaac agcaggcatg gtgaaagtaa cgtctgacag aagcatgtgc
1801 acttcgggaa gcaggcctgc atcttacctg tacagtattt gcattccaca gatggaacgg
1861 tttggagaag cactttttca tacttttgtg aaagtataca tgttggccca gtctctcgta
1921 tctgtacctt tgtccctagt actgtaactg ccaatctgtc tgtgtaagct ggaatctgtg
1981 gcaactatta ccctgtg
//