LOCUS AK302459 3410 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ58708 complete cds, weakly similar to Mus
musculus GTPase, very large interferon inducible 1, transcript
variant A, mRNA.
ACCESSION AK302459
VERSION AK302459.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3410)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3410
/clone="TESTI4006347"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497083"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 518..3184
/codon_start=1
/note="weakly similar to Mus musculus GTPase, very large
interferon inducible 1, transcript variant A, mRNA"
/protein_id="BAH13717.1"
/transl_table=1
/translation="MEGDDCEFRYGDGTNEAQDNDFPAVERSRLQEMLSLLGLETYQV
QKLSLQDSLQISFDSMKNWAPQVPKDLPWNFLRKLQALNADARNTTMVLDVLPDARPV
EKESQMEEEIIYWDPADDLAADIYSFSELPTPDTPVNPLDLLCALLLSSGSFLQQEIA
LKMALCQFALPLVLPDSENHYHTFLLWAMRGIVRTWWSQPPRGMGSFREDSVVLSRAP
AFAFVRMDVSSNSKSQLLNAVLSPGHRQWDCFWHRDLNLGTNAREISDGLVEISWFFP
SGREDLDIFPEPVAFLNLRGDIGSHWLQFKPLTEISSAVFILTDNISKKEYKLLYSMK
ESTTKYYFILSPYRGKRNTNLRFLNKLIPVLKIDHSHVLVKVSSTDSDSFVKRIRAIV
GNVLRAPCRRVSVEDMAHAARKLGLKVDEDCEECQKAKDRMERITRKIKDSDAYRRDE
LRLQGDPWRKAAQVEKEFCQLQWAVDPPEKHRAELRRRLLELRMQQNGHDPSSGVQEF
ISGISSPSLSEKQYFLRWMEWGLARVAQPRLRQPPETLLTLRPKHGGTTDVGEPLWPE
PLGVEHFLREMGQFYEAESCLVEAGRLPAGQRRFAHFPGLASELLLTGLPLELIDGST
LSMPVRWVTGLLKELHVRLERRSRLVVLSTVGVPGTGKSTLLNTMFGLRFATGKSCGP
RGAFMQLITVAEGFSQDLGCDHILVIDSGGLIGGALTSAGDRFELEASLATLLLGLSN
VTVISLAETKDIPAAILHAFLRLEKTGHMPNYQFVYQNLHDVSVPGPRPRDKRQLLDP
PGDLSRAAAQMEKQGDGFRALAGLAFCDPEKQHIWHIPGLWHGAPPMAAVSLAYSEAI
FELKRCLLENIRNGLSNQNKNIQQLIELVRRL"
BASE COUNT 780 a 906 c 1035 g 689 t
ORIGIN
1 actgtggggc cgtcgtcgcc gcgtgccgag cgtcctggcg cggccgaggg gaagcagcgg
61 ggctgcccgg gttacgctgg ccacccgcac ctggtcctgt ggcttcgacc actagtcagc
121 aaggccccgg agaggccagc gaagaggagg ggctcgttgg ctttacggag acgcgcggag
181 caccctcaag gtgccacacg ctcgcctgct ccctgttcct acatcctggg cgtcttccca
241 ggctgtcata taactcctga gaatagtggt tcttaactct aaagagtctt gctgtgtcac
301 ccaggctgga gtgcagtggt gaaatcttgg ctcactgtgg cttcagcctc ccaggctcaa
361 gagatcctac catctcagcc tcctgagtag ctgggactac aggatagaag tggaattact
421 gggcaaaggg cattcagatt tgggagaagt agccccagaa ataaaagcat cagagagacg
481 aacagctgtg gccattgcag atttggaatg gagagaaatg gaaggagatg attgcgagtt
541 ccgttatgga gatggtacaa atgaggctca ggacaatgat tttccagcag tggagagaag
601 caggcttcaa gaaatgctgt cacttttggg cctagagacg taccaggtcc agaaactcag
661 cctccaggac tctctgcaga tcagttttga cagtatgaag aactgggccc ctcaggttcc
721 caaagacttg ccctggaatt tcctcaggaa gttgcaggcc ctcaatgctg atgccaggaa
781 taccactatg gtgctggacg tgctcccaga cgccaggcct gtggagaagg agagccagat
841 ggaagaggag atcatctact gggacccagc tgatgacctt gctgccgaca tttattcctt
901 ttctgagctg cccacccctg atacgccagt gaacccctta gaccttctct gtgccctgct
961 gctctcctca ggcagtttcc tgcaacaaga aatagcgttg aaaatggccc tctgccagtt
1021 tgcactccca ctcgtgttgc ctgactcgga gaaccactac catacatttc tgctgtgggc
1081 catgcggggc attgtgagga catggtggtc ccagccccca aggggcatgg ggagcttccg
1141 ggaagacagc gtggtcttgt ccagggcgcc cgccttcgcc ttcgtgcgca tggacgtcag
1201 tagcaactcc aagtcccagc ttctcaacgc cgtcctcagc ccgggccaca ggcagtggga
1261 ctgcttctgg catcgggacc tcaacttggg caccaatgcc cgggagattt cggatgggtt
1321 ggtagaaatt tcctggtttt ttcccagcgg aagggaggac ttggacattt tcccagaacc
1381 tgtggccttt ctgaacctga gaggtgacat cgggtctcac tggctgcagt ttaagccctt
1441 gacagagatc tcctccgctg tgtttatatt gactgacaat atcagtaaga aggaatacaa
1501 attgctgtac tccatgaagg agtcaaccac aaaatactac ttcatcctga gtccctaccg
1561 tgggaagcgc aacacaaacc tgagatttct gaataagtta attcctgtgc tgaaaataga
1621 ccactcacat gtcctggtaa aggtcagcag cactgacagc gacagcttcg tgaagaggat
1681 ccgggccatc gttgggaatg tgctgcgggc accctgcagg cgggtatctg tggaggacat
1741 ggcgcacgca gcccgcaaac tgggcctaaa ggtcgacgag gactgtgagg agtgtcagaa
1801 agcgaaagac cggatggaga ggattaccag gaaaatcaaa gactcggatg cctacagaag
1861 ggacgagctg aggctgcagg gggacccctg gagaaaggca gcccaagtgg agaaggagtt
1921 ctgccagctc cagtgggccg tggacccccc tgagaagcac agggctgagc tgaggcggcg
1981 gctgctagaa cttcgaatgc agcagaacgg ccatgatccc tcctcggggg tgcaggagtt
2041 catctcgggg atcagcagcc cctccttgag tgagaagcag tacttcctga ggtggatgga
2101 gtggggcctg gcacgggtgg cccagccgcg actgagacag cctccggaga cgcttctcac
2161 cctgagacca aagcacgggg gcaccacaga cgtgggggag ccgctctggc ctgagcccct
2221 aggggtggaa cacttcttgc gggagatggg acagttttat gaggctgaga gctgtcttgt
2281 ggaggcaggg aggctgccgg caggccagag gcgttttgcc cacttcccag gcttggcctc
2341 ggagctgctg ctgacagggc tgcctctgga gctaatcgat gggagcacgc tgagcatgcc
2401 cgtccgctgg gtcacagggc tcctgaagga gctgcatgtc cgactggaga gacggtcaag
2461 gctggtggtt ctgtcaaccg tcggggtgcc aggcacgggc aagtccacac tcctcaacac
2521 catgtttggg ctgcggtttg ccacagggaa gagctgcggt cctcgagggg ccttcatgca
2581 gctcatcaca gtggctgagg gcttcagcca ggacctgggc tgtgaccaca tcctggtgat
2641 agactccggg ggcttgatag gtggggcctt gacgtcagct ggggacagat ttgagctgga
2701 ggcttccttg gccactctgc tcctgggact gagcaatgtc accgtgatca gtctagctga
2761 aaccaaggac attccagcag ctattctgca tgcatttctg aggttagaaa aaacggggca
2821 catgcccaac taccagtttg tataccagaa ccttcatgat gtatctgttc ccggccctag
2881 gcccagagac aagagacagc tcctggatcc acctggtgac ctgagcaggg ctgcagccca
2941 gatggagaaa cagggcgacg gcttccgggc actggcaggc ctggccttct gcgaccctga
3001 gaagcagcac atctggcaca tcccaggcct gtggcacgga gcacctccca tggccgcagt
3061 gagcttggcc tacagtgaag ccatatttga attgaagaga tgcctactcg aaaacatcag
3121 gaacggcttg tcgaaccaaa acaaaaacat ccagcagctc attgagctgg tgagacggct
3181 gtgagtgtgc agagaaaccc agttcaggtg taggaggctg ctgtgggcag ccctgtctga
3241 tggggcaccc gtgtggggct gtgctctggt gcctgagaat ggctggtgcc caatcgacat
3301 gagaagacga gcaaaagaca gagggtttgg agtctcctca acagtgttaa aagaggaagt
3361 gacctcacag accagctcag agatgttacc aagaatatca cagcccccag
//