LOCUS AK302412 1973 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57669 complete cds, highly similar to
SWI/SNF-related matrix-associatedactin-dependent regulator of
chromatin subfamily C member 1.
ACCESSION AK302412
VERSION AK302412.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1973)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1973
/clone="TESTI4001427"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497036"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 42..1880
/codon_start=1
/note="highly similar to SWI/SNF-related
matrix-associatedactin-dependent regulator of chromatin
subfamily C member 1"
/protein_id="BAG63721.1"
/transl_table=1
/translation="MIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNY
QVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPVD
LQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT
QDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDE
PERLEGAEEEKMEADPDGQQPEKAKNKVENETDEGDKAQDGENEKNSEKEQDSEVSED
TKSEEKETEENKELTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLA
AVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFH
MEQLKYAELRARQQMEQQQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPL
MHHQMPPPHPPQPGQIPGPGSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGN
ILGPRVPLTAPNGMYPPPPQQQPPPPPPADGVPPPPAPGPPASAAP"
BASE COUNT 572 a 507 c 490 g 404 t
ORIGIN
1 aatccaagac tccagaaata tacttggcat atcgaaattt tatgattgac acgtatcgtc
61 taaaccccca agagtattta actagcactg cttgtcggag gaacttgact ggagatgtgt
121 gtgctgtgat gagggtccat gcctttttag agcagtgggg actcgttaat taccaagttg
181 acccggaaag tagacccatg gcaatgggac ctcctcctac tcctcatttt aatgtattag
241 ctgatacccc ctctgggctt gtgcctctgc atcttcgatc acctcaggtt cctgctgctc
301 aacagatgct aaattttcct gagaaaaaca aggaaaaacc agttgatttg cagaactttg
361 gtctccgtac tgacatttac tccaagaaaa cattagcaaa gagtaaaggt gctagtgctg
421 gaagagaatg gactgaacag gagacccttc tactcctgga ggccctggag atgtacaagg
481 atgattggaa caaagtgtcg gaacatgttg gaagtcgtac tcaggatgaa tgcatcctcc
541 actttttgag acttcccatt gaggacccat accttgagaa ttcagatgct tcccttgggc
601 ctttggccta ccagcctgtc cccttcagtc agtcaggaaa tccagttatg agtactgttg
661 cttttttggc atctgtggtg gaccctcgcg tggcatctgc tgcagcaaaa gcggctttgg
721 aggagttttc tcgggtccgg gaggaggtac cactggaatt ggttgaagct catgtcaaga
781 aagtacaaga agcagcacga gcctctggga aagtggatcc cacctacggt ctggagagca
841 gctgcattgc aggcacaggg cccgatgagc cagagaggct tgaaggagct gaagaggaaa
901 aaatggaagc cgaccctgat ggtcagcagc ctgaaaaggc aaaaaataaa gtggaaaatg
961 aaacggatga aggtgataaa gcacaagatg gagaaaatga aaaaaatagt gaaaaggaac
1021 aggatagtga agtgagtgag gataccaaat cagaagaaaa ggagactgaa gagaacaaag
1081 aactcactga tacatgtaaa gaaagagaaa gtgatactgg gaagaagaaa gtagaacatg
1141 aaatttccga aggaaatgtt gccacagccg cagcagctgc tcttgcctca gcggctacca
1201 aagccaagca cctggctgca gtggaagaaa gaaagatcaa gtccctggta gctctcttgg
1261 ttgagacaca aatgaagaaa ctagagatca aacttcgaca ttttgaagag ctggaaacta
1321 tcatggacag agagaaagaa gctctagaac aacagaggca gcagttgctt actgaacgcc
1381 aaaacttcca catggaacag ctgaagtatg ctgaattacg agcacgacag caaatggaac
1441 agcagcagca tggccagaac cctcaacagg cacaccagca ctcaggagga cctggcctgg
1501 ccccacttgg agcagcaggg caccctggca tgatgcctca tcaacagccc cctccctacc
1561 ctctgatgca ccaccagatg ccaccacctc atccgcccca gccaggtcag ataccaggcc
1621 caggttccat gatgcccggg cagcacatgc caggccgcat gattcccact gttgcagcca
1681 acatccaccc ctctgggagt ggccctaccc ctcctggcat gccaccaatg ccaggaaaca
1741 tcttaggacc ccgggtaccc ctgacagcac ctaacggcat gtatccccct ccaccacagc
1801 agcagccacc gccaccacca cctgcagatg gggtccctcc gcctcctgct cctggcccgc
1861 cagcctcagc tgctccttag cctggaagat gcagggaacc tccacgccca ccaccatgag
1921 ctggagtggg gatgacaaga cttgtgttcc tcaactttct tgggtttctt tca
//