LOCUS AK302408 4090 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61471 complete cds, highly similar to Homo sapiens tetratricopeptide repeat domain 21A (TTC21A), mRNA. ACCESSION AK302408 VERSION AK302408.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4090) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..4090 /clone="TESTI4001239" /clone_lib="TESTI4" /db_xref="H-InvDB:HIT000497032" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="testis" CDS 71..3979 /codon_start=1 /note="highly similar to Homo sapiens tetratricopeptide repeat domain 21A (TTC21A), mRNA" /protein_id="BAG63718.1" /transl_table=1 /translation="MSSNDSSLMAGIIYYSQEKYFHHVQQAAAVGLEKFSNDPVLKFF KAYGVLKEEHIQDAISDLESIRHHPDVSLCSTMALIYAHKRCEIIDREAIQELEYSLK EIRKTVSGTALYYAGLFLWLIGRHDKAKEYIDRMLKISRGFREAYVLRGWVDLTSDKP HTAKKAIEYLEQGTQDTKDVLGLMGKAMYFMMQQNYSEALEVVNQITVTSGSFLPALV LKMQLFLARQDWEQTVEMGHRILEKDESNIDACQILTVHELAREGNMTTATNHVRNLI KALETREPENPSLHLKKIIVVSRLCGSHQVILGLVCSFIERTFMATPSYVHVATELGY LFILKNQVKEALLWYSEAMKLDKDGMAGLTGIILCHILEGHLEVQKSLGKSEVLIFLQ ALLMSRKHKGEEETTALLKEAVELHFSSMQGIPLGSEYFEKLDPYFLVCIAKEYLLFC PKQPRLPGQIVSPLLKQVAVILNPVVKAAPALIDPLYLMAQVRYYSGELENAQSILQR CLELDPASVDAHLLMCQIYLAQGNFGMCFHCLELGVSHNFQVRDHPLYHLIKARALNK AGDYPEAIKTLKMVIKLPALKKEEGRKFLRPSVQPSQRASILLELVEALRLNGELHEA TKVMQDTINEFGGTPEENRITIANVDLVLSKGNVDVALNMLRNILPKQSCYMEAREKM ANIYLQTLRDRRLYIRCYRELCEHLPGPHTSLLLGDALMSILEPEKALEVYDEAYRQN PHDASLASRIGHAYVKAHQYTEAIEYYEAAQKINGQDFLCCDLGKLLLKLKKVNKAEK VLKQALEHDIVQDIPSMMNDVRCLLLLAKVYKSHKKEAVIETLNKALDLQSRILKRVP LEQPEMIPSQKQLAASICIQFAEHYLAEKEYDKAVQSYKDVFSYLPTDNKVMLELAQL YLLQGHLDLCEQHCAILLQTEQNHETASVLMADLMFRKQKHEAAINLYHQVLEKAPDN FLVLHKLIDLLRRSGKLEDIPAFFELAKKVSSRVPLEPGFNYCRGIYCWHIGQPNEAL KFLNKALKDSTWGQSAIYHMVQICLNPDNEVVGGEAFENQGAESNYMEKKELEQQGVS TAEKLLREFYPHSDSSQTQLRLLQGLCRLATREKANMEAALGSFIQIAQAEKDSVPAL LALAQAYVFLKQIPKARMQLKRLAKTPWVLSEAEDLEKSWLLLADIYCQGSKFDLALE LLRRCVQYNKSCYKAYEYMGFIMEKEQSYKDAVTNYKLAWKYSHHANPAIGFKLAFNY LKDKKFVEAIEICNDVLREHPDYPKIREEILEKARKSLRP" BASE COUNT 1088 a 1057 c 1093 g 852 t ORIGIN 1 gaccctgcct cgggaatccc gctctgcacc gccccaccag acccggactc ggagccgcga 61 gcggcccgag atgagcagca atgactcctc ccttatggct gggatcattt actatagcca 121 ggaaaagtac ttccaccatg tgcagcaggc tgcagctgtg ggcctggaaa aattcagcaa 181 tgaccctgtg ttgaagttct ttaaagccta tggagtcctc aaagaagagc acatccagga 241 tgccatcagt gacctggaaa gcatcaggca tcacccagac gtgtccctgt gctccaccat 301 ggccctcatt tatgctcaca aaagatgtga aatcattgac cgagaagcaa ttcaggagct 361 tgagtacagc ctgaaggaaa tacgcaagac agtcagtggg actgcactgt actatgctgg 421 ccttttcctc tggctcatag gccgccatga caaggccaaa gagtacattg accgcatgct 481 gaagatttct agaggcttca gagaggccta tgtgctcaga ggctgggtgg acctgacctc 541 agacaagccc cacactgcga agaaagccat tgagtacctg gaacaaggaa ctcaggacac 601 caaagatgtg ctggggctga tgggaaaggc aatgtacttc atgatgcagc agaactactc 661 agaggccctg gaggtggtga accagatcac tgtgacttca gggagcttcc tgccagccct 721 cgtcctgaag atgcagctgt tcttagctcg gcaggactgg gagcagacag tagaaatggg 781 acacagaatc ctagaaaaag atgagagcaa tattgatgcc tgccaaattc taaccgtgca 841 tgagcttgca agagaaggaa acatgaccac agctaccaat cacgttagaa atctgattaa 901 ggcactagag acaagggaac ccgaaaatcc aagcctccat cttaaaaaaa ttattgtggt 961 tagccgactg tgtgggagtc accaggtgat tctagggcta gtgtgtagtt tcatcgagcg 1021 caccttcatg gccaccccct cgtatgtcca tgtggccaca gaactgggct atctcttcat 1081 cctgaagaac caagtgaaag aggccttgct gtggtattca gaagccatga aactggacaa 1141 ggatggcatg gctggtttga cagggatcat cttgtgtcat atcttagaag gccacctgga 1201 ggtgcagaag tcccttggga agtctgaggt gctaattttc ctccaagccc tcctgatgtc 1261 caggaagcac aagggggagg aagagaccac agcgctcctg aaggaggcag tggagcttca 1321 cttctccagc atgcaaggca tccctcttgg ctctgagtac tttgaaaagc tggacccgta 1381 cttcctggtc tgcattgcta aggagtactt gctcttctgc cccaagcagc ccaggttacc 1441 aggccagatc gtgtctccac ttcttaaaca agtcgccgtg atcttgaatc ctgtagtcaa 1501 agcagcacca gctctgatcg accccctgta tttgatggct caggtcaggt attactcagg 1561 agagctagag aatgcccaga gcatcctgca gcgttgcctg gagctggacc ccgcctccgt 1621 ggatgcccat ctcctcatgt gtcagatcta cttggctcag ggcaactttg gcatgtgctt 1681 ccactgctta gagctgggtg tcagccacaa cttccaggtc cgagatcacc ccctctacca 1741 cctcatcaag gccagggccc tcaacaaggc tggagactat ccagaggcca taaagacgct 1801 gaaaatggtc atcaaattgc cagctctgaa gaaggaagaa ggcagaaagt tcctcaggcc 1861 ctctgtgcag cctagccagc gggcatccat cttattggaa ctggtggagg ccctccggct 1921 gaatggggag ctacatgagg ccaccaaggt catgcaggac accatcaatg agttcggtgg 1981 cacaccagaa gagaaccgca tcaccattgc caacgtggac ttggtcctga gcaagggcaa 2041 tgtggacgtg gcgctgaaca tgctaaggaa catcttgccc aagcagtcct gctatatgga 2101 agccagagag aagatggcca acatctacct gcagaccctc agagacaggc gcctctacat 2161 cagatgctac cgtgagctct gtgaacatct gcctggcccc cacaccagcc tgctactggg 2221 cgatgcctta atgagcattc tggagcccga gaaggccctg gaggtctatg atgaggccta 2281 tagacagaac ccacatgacg cctccctggc cagcagaatt gggcacgctt atgtgaaggc 2341 ccaccagtat actgaggcaa ttgagtatta tgaggctgcc cagaagatta atggacagga 2401 ctttctgtgc tgcgatctgg gcaaactgct cctgaagtta aagaaggtca ataaagcaga 2461 aaaagttttg aagcaggcac tggaacatga cattgtccaa gacatcccat ccatgatgaa 2521 tgatgttagg tgcctgcttt tgctggcaaa ggtttacaag agccataaaa aagaagctgt 2581 gatagaaact ttgaacaagg ccttggacct ccagtctcgg atactgaagc gagttccact 2641 ggagcaacca gaaatgattc cctcccagaa gcaactggca gcctctatct gcatccaatt 2701 tgcagagcac tacctggcag agaaagagta tgacaaggcg gtacagtctt ataaggatgt 2761 cttctcctac ttgccaactg acaataaggt gatgctggag ctggcgcagc tctacctgct 2821 ccaggggcac ctggacctgt gtgagcagca ctgtgccatc ctcctgcaga ctgagcagaa 2881 ccatgagacc gcttctgtgt tgatggctga cctgatgttt agaaaacaga aacatgaagc 2941 ggccatcaat ctttaccacc aagtcttgga gaaagcgcca gacaattttt tggtattgca 3001 taaattaatc gatctgctaa gaagaagtgg aaaacttgaa gacattcctg ccttctttga 3061 attggccaag aaggtgtcta gccgggtgcc tttggaacca gggttcaatt actgcagagg 3121 tatctactgc tggcacatag ggcagcccaa cgaagcctta aagttcctga acaaggcact 3181 caaggacagc acttggggcc agagcgccat ctaccacatg gtgcagatct gtctgaatcc 3241 agacaacgag gttgtgggcg gagaggcttt tgagaaccag ggagctgaga gcaactacat 3301 ggagaagaag gagttggagc agcagggtgt gagcaccgcc gagaaactgc tgcgtgagtt 3361 ttacccacat tcagactcca gccagaccca gctgcggctg ctgcagggcc tctgccggct 3421 ggccaccagg gagaaggcta acatggaggc tgcgctgggc agcttcatcc agatagcgca 3481 ggctgagaag gacagcgtcc ctgccctgct ggccttggca caagcctacg tgttcctgaa 3541 gcagatcccc aaggcgcgta tgcagttgaa gcgcctggcc aagaccccct gggtgctgag 3601 tgaggctgag gacctggaga agagctggct cctgctggct gacatttact gccagggcag 3661 caagttcgac ctcgccttag aactgctgcg gcgctgtgtg caatacaaca agtcctgcta 3721 caaggcctat gagtacatgg gcttcatcat ggagaaggag cagtcctaca aggatgcagt 3781 caccaactac aaactggcct ggaagtacag tcatcacgcc aaccctgcca ttggcttcaa 3841 acttgctttc aactacctga aggacaagaa atttgtggag gccatcgaaa tctgcaacga 3901 tgtcctcagg gagcaccccg actaccccaa gatcagggag gaaattttgg aaaaggcccg 3961 aaagtccctg aggccctagc tggggtcaag gggcctggac cagtagaagc catcaaccta 4021 ctgaagttgt gtggagggat ggaaagtggg tcagtggaga agggattcag aaaatgacac 4081 attcttcccc //