LOCUS AK302404 2747 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53942 complete cds, highly similar to
Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.1.2.15).
ACCESSION AK302404
VERSION AK302404.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2747)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2747
/clone="TESTI4001007"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000497028"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 86..2482
/codon_start=1
/note="highly similar to Ubiquitin carboxyl-terminal
hydrolase 13 (EC 3.1.2.15)"
/protein_id="BAG63715.1"
/transl_table=1
/translation="MNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALP
KRRNSKIFLDLDTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAV
LSSKSPYRKQDPDTWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLT
DGSVLCGKWFFDSSGGNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPH
LAKHLAHFGIDMLHMHGTENGLQDNDIKLRVSEWEVIQESGTKLKPMYGPGYTGLKNL
GNSCYLSSVMQAIFSIPEFQRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQY
SKPPVKSELIEQVMKEEHKPQQNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVN
LVERNRIGSENPSDVFRFLVEERIQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELI
AYELTRREAEANRRPLPELVRAKIPFSACLQAFSEPENVDDFWSSALQAKSAGVKTSR
FASFPEYLVVQIKKFTFGLDWVPKKFDVSIDMPDLLDINHLRARGLQPGEEELPDISP
PIVIPDDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEACRKAVYFTGNMGAEVAFNW
IIVHMEEPDFAEPLTMPGYGGAASAGASVFGASGLDNQPPEEIVAIITSMGFQRNQAI
QALRATNNNLERALDWIFSHPEFEEDSDFVIEMENNANANIISEAKPEGPRVKDGSGT
YELFAFISHMGTSTMSGHYICHIKKEGRWVIYNDHKVCASERPPKDLGYMYFYRRIPS
"
BASE COUNT 825 a 581 c 670 g 671 t
ORIGIN
1 gttccgaact gcacgttgca gatcgtttgc gtcctccgcg gggcagagcg cagggcggaa
61 ttctgaaggt ggactctatg tatgcatgaa tacatttttg gcctttggaa gggaacatgt
121 tgaaagacat tttcgaaaaa ctggacagag tgtatacatg cacctgaaaa gacatgtgcg
181 agagaaggta agaggggcgt ctggtggagc gttaccaaaa aggaggaatt ccaagatttt
241 tttagatcta gatactgatg acgatttaaa tagcgacgat tatgaatatg aagatgaagc
301 caaacttgtt atattcccag atcactatga aatagcacta ccaaatattg aggagttacc
361 agccctggta acaattgctt gtgatgcagt tctcagctca aaatctccat acagaaagca
421 ggacccagac acgtgggaaa atgaattgcc agtatctaaa tatgccaaca acctcaccca
481 gctggacaat ggagtcagga ttcctccaag tggttggaag tgtgccagat gcgacctgcg
541 agaaaacctc tggttgaatc tgactgacgg ctctgtcctg tgtggaaagt ggttctttga
601 cagctctggg ggcaacgggc atgcgctgga gcattacaga gacatgggct acccactagc
661 cgtgaaactg ggaaccatca ctcctgacgg ggcagatgtt tattcttttc aagaagaaga
721 acctgttttg gatcctcatt tggccaagca cttagcgcat tttggaattg atatgcttca
781 tatgcatggg acagagaatg ggctccagga caatgacatc aagctgaggg tcagtgagtg
841 ggaagtgatc caggagtcgg gcacgaaact gaagccaatg tatggtcctg gctacacggg
901 tctgaagaac ctgggcaaca gctgctatct cagctctgtc atgcaggcca tcttcagcat
961 cccagaattc cagagagcgt atgtaggaaa ccttcccaga atatttgact actcgccttt
1021 agatccaaca caagatttca acacacagat gactaagtta ggacatggcc ttctctcagg
1081 ccagtattca aagcctccgg tgaaatctga actcattgaa caggtgatga aggaggagca
1141 caagccacag cagaacggga tctctccgcg catgtttaag gcctttgtaa gcaagagcca
1201 cccggaattc tcctctaaca ggcagcaaga tgcccaggaa ttcttcttgc acctggtgaa
1261 tctagtagag aggaaccgca tcggctcaga aaacccaagc gatgtttttc gttttttggt
1321 ggaagaacgc attcagtgct gtcagacccg gaaagtccgc tacacggaga gggtggatta
1381 cctgatgcag ttacctgtgg ccatggaggc ggcaaccaac aaggatgaac tgatcgctta
1441 tgaactaacg agaagggaag cagaagcaaa cagaagaccc cttcctgagt tggtacgtgc
1501 caagatacca tttagtgcct gccttcaggc cttctctgaa ccagaaaatg ttgatgattt
1561 ctggagcagt gccctacaag caaagtctgc gggtgtgaaa acatctcgct ttgcttcatt
1621 ccctgaatac ttggtagtgc agataaagaa gttcactttt ggtcttgact gggttcccaa
1681 aaaatttgat gtttctattg atatgccaga cctacttgat atcaaccatc tccgagccag
1741 ggggttacag ccaggagagg aagaacttcc agacatcagc ccccccatag tcattcctga
1801 tgactcaaaa gatcgcctga tgaaccaatt gatagaccca tcagacatcg atgagtcatc
1861 agtgatgcag ctggccgaga tgggtttccc gctggaagca tgtcgcaagg ctgtgtactt
1921 cactggaaat atgggcgccg aggtggcctt caactggatc attgttcaca tggaagagcc
1981 agattttgct gagccgctga ccatgcctgg ttatggaggg gcagcttctg ctggagcctc
2041 tgtttttggt gcttctggac tggataacca acctccagag gaaatcgtag ctatcatcac
2101 ctccatggga tttcagcgaa atcaggctat tcaggcacta cgagcaacga ataataacct
2161 ggaaagagca ctggattgga tctttagcca ccctgagttt gaagaagaca gtgattttgt
2221 gattgagatg gagaataatg ccaatgcaaa cattatttct gaggccaagc ccgaaggacc
2281 tagagtcaag gatggatctg gaacatatga gctatttgca ttcatcagtc acatgggaac
2341 atccacaatg agtggtcatt acatttgcca tatcaaaaag gaaggaagat gggtgattta
2401 caatgaccac aaagtttgtg cctcagaaag gccccctaaa gacctgggct acatgtactt
2461 ttaccgcagg ataccaagct aaacctcaaa tataaaaatt ggcgaaaaga agccatacgc
2521 ctttttaatt tgccaaaaaa aaaaagaaga agaagaagtt gaaacaacta gacatgaagg
2581 aatatatggg gtatttatcg tttatttaaa gagcacgatc agttgacacc ttctgaaata
2641 gaactgagaa gaaatttcta ttagtgatga tacactatta tattgtagat agtttttata
2701 aatgttcaaa aagatgatga tatttaaaaa caaaaaaagt attcata
//