LOCUS AK302384 1230 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61465 complete cds, highly similar to Homo
sapiens vacuolar protein sorting 37C (VPS37C), mRNA.
ACCESSION AK302384
VERSION AK302384.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1230)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1230
/clone="TESTI2053699"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000497008"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 129..1097
/codon_start=1
/note="highly similar to Homo sapiens vacuolar protein
sorting 37C (VPS37C), mRNA"
/protein_id="BAG63701.1"
/transl_table=1
/translation="METLKDKTLQELEELQNDSEAIDQLALESPEVQDLQLEREMALA
TNRSLAERNLEFQGPLEISRSNLSDRYQELRKLVERCQEQKAKLEKFSSALQPGTLLD
LLQVEGMKIEEESEAMAEKFLEGEVPLETFLENFSSMRMLSHLRRVRVEKLQEVVRKP
RASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPSAMPPYPLPYSPSPSLPVGPT
AHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTP
MGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPFSLC"
BASE COUNT 246 a 405 c 362 g 217 t
ORIGIN
1 actggggcgc cggacgttgc aagggggtca catccggtag ggggcgggcc tggcggaccc
61 cggaagtgtg ggcgcggctg cggtttaacc cgcggtggcg gcggcgacgg cggccctggc
121 agggaaggat ggagacgctg aaggataaga ccctgcagga gctggaggag ttgcagaatg
181 actcggaggc gattgaccag ctggccctgg agtcccctga ggtccaggac ctacagctgg
241 aacgggagat ggcactggcc accaaccgga gcctggcaga gcggaacttg gagttccagg
301 gtcccctgga gatcagccgc tcaaacctct cggatagata ccaggagctc cggaagctcg
361 tggagcggtg ccaggagcag aaggcaaagc tggagaaatt ttcttcagca ctgcagccag
421 ggaccttgtt agaccttctg caggtggaag gcatgaagat cgaagaagag tccgaggcca
481 tggctgagaa gttcctggag ggcgaggtgc ccctggaaac gttcctggag aatttttcct
541 ccatgaggat gctgtcccac ctgcgccggg ttcgcgtgga aaagctccag gaagtggtga
601 ggaagcccag ggcttcccag gagctggccg gcgatgcccc tccaccccgt ccaccacccc
661 cggtgcgccc agtcccccag ggaacacccc ctgtggttga agagcagccg cagccaccat
721 cagccatgcc tccctaccct ttgccctaca gcccatcccc cagcctgcct gtgggcccca
781 ctgcccatgg agccctgcca ccggcccctt tcccagtagt gtcccagccc tccttctaca
841 gcgggcctct gggccccact tacccggcag cccagcttgg acccaggggt gctgcgggtt
901 actcctggtc cccacagagg agcatgccac cccggccggg ctatcctggg accccaatgg
961 gtgcctctgg gcctgggtac cccttgcggg gaggcagggc ccccagtcct ggttatcctc
1021 aacagtcccc ataccccgca acaggaggaa aacctcccta cccaatacag cctcagctcc
1081 ccttctcact ctgttgatgt aatcctccca cccccagtgt ccatcctaag acaggcatca
1141 aaagaggccc taactttact tcccaaatgg tgctttttaa aaaacaccat cactacatta
1201 ggggcaattt tttcacacct ccctgtcttc
//