LOCUS AK302365 1707 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59638 complete cds, moderately similar to
Ataxin-3 (EC 3.4.22.-).
ACCESSION AK302365
VERSION AK302365.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1707)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1707
/clone="TESTI2052676"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496989"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 468..1535
/codon_start=1
/note="moderately similar to Ataxin-3 (EC 3.4.22.-)"
/protein_id="BAG63689.1"
/transl_table=1
/translation="MDFIFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEE
RMRMAEGGVTSEEYLAFLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKL
GIDPINERSFICNYKQHWFTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAY
SVFVVKGDLPDCEADQLLQISSVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEESDE
SGTSDQDEEDFQRALELSRQETNREDEHLRSTIELSMQGSSGNTSQDLPKTSCVTPAS
EQPKKIKEDYFEKHQQEQKQQQQQSDLPGHSSYLHERPTTSSRAIESDLSDDISEDTV
QAAVDTILEIMRKNLKIKGEK"
BASE COUNT 586 a 338 c 331 g 452 t
ORIGIN
1 aaaaaatccc atggtgtcca ttcggttaaa gcccatgtta tttctctccc agttacctgc
61 caaatcttct gtttagtgct gtggtaaatt tcacctttat ttacttacta aaaccatgct
121 gacaagcata attagagaga cattattttt ataggacatc tgaaattcca acgggcacta
181 ctatggtgca agtcaccatt atcatctatg ggataactcc aaaatcccat attcacttta
241 ggtttaccat cagcttttga ctggatactg gcaaaaccac cttggtcaca atagtgcttt
301 gtgacatacc atctcttacc tgaatacctg caaaaaccca tggtcttcat aaggtttgaa
361 aacctaacat ctgttacatg gctatccaca aactgcccag gtaactgcca tagctgggca
421 tacaacatct tccggcatac ctacagaaac tcacggatac aattaacatg gatttcatct
481 ttcatgagaa acaggaaggt ttcctgtgtg ctcagcactg tctgaacaat ctattgcaag
541 gagaatattt tagccctgtg gaattagcct caattgcaca tcagctagat gaagaagaga
601 ggatgagaat ggcagaagga ggagtcacca gtgaagagta tcttgcattt ttacagcagc
661 cttcagaaaa catggatgat accggtttct tctccattca ggtaataagc aatgccttga
721 agttctgggg tttagagatc atccatttca ataatcctga atatcagaag ctcggcattg
781 atcctataaa tgaaagatct tttatatgta attataaaca acactggttt actattagaa
841 aatttggaaa acactggttt aacttgaatt ctctcttggc gggtccagaa ttaatatcag
901 atacatgcct tgcaaatttc ttggctcgat tacaacaaca agcatattct gtatttgttg
961 tcaagggtga tctgccagac tgtgaagctg accaactcct gcagatcagc agtgtcgaag
1021 agatggatac accaaaactt aatggaaaaa aattagtaaa acaaaaagag catagagtct
1081 ataaaacagt ccttgaaaaa gtatcagaag aaagtgatga gtctggaaca tcagaccaag
1141 atgaggagga ttttcagagg gcccttgaac taagccgcca agaaaccaat agagaagatg
1201 aacatctccg cagtactatt gagttaagca tgcaaggtag ttccggaaac acatcgcaag
1261 atcttccaaa gacatcatgt gtaactcctg cttcagaaca gccgaagaaa ataaaagaag
1321 actattttga aaagcatcag caggaacaga agcagcagca acaacagtca gatctgccgg
1381 gccacagttc atacctacac gaaagaccaa caacaagttc gagagcaatt gagagtgatc
1441 tcagtgatga catcagtgaa gacacagtac aggccgctgt cgacaccatt ttagaaatta
1501 tgagaaagaa tttgaaaatc aaaggggaaa aataatgcct ttaaaaataa tttagatagt
1561 catactttcc aacattatcc tgtgtgatta tactgtagga tccattttgg tcatctgtca
1621 aagagatgag gaaataaggc ttttagacag tttgcaaaca aaatgacgag agagatgtgg
1681 gactaaataa tgatcgttca actacta
//