LOCUS AK302300 1399 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59827 complete cds, highly similar to Homo
sapiens translin-associated factor X interacting protein 1
(TSNAXIP1), mRNA.
ACCESSION AK302300
VERSION AK302300.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1399)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1399
/clone="TESTI2045974"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496924"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 247..1299
/codon_start=1
/note="highly similar to Homo sapiens translin-associated
factor X interacting protein 1 (TSNAXIP1), mRNA"
/protein_id="BAG63640.1"
/transl_table=1
/translation="MSLAQSPGIWGEDPVKLTLALKMTRQDLTRTQMELNNMKANFGD
VVPRRDFEMQEKTNKDLQEQLDTLRASYEEVRKEHEILMQLHMSTLKERDQFFSELQE
IQRTSTPRPDWTKCKDVVAGGPERWQMLAEGKNSDQLVDVLLEEIGSGLLREKDFFPG
LGYGEAIPAFLRFDGLVENKKPSKKDVVNLLKDAWKERLAEEQKETFPDFFFNFLEHR
FGPSDAMAWAYTIFENIKIFHSNEVMSQFYAVLMGKRSENVYVTQKETVAQLLKEMTN
ADSQNEGLLTMEQFNTVLKSTFPLKTEEQIQELMEAGGWHPSSSNADLLNYRSLFMED
EEGQSEPFVQKPWLLR"
BASE COUNT 373 a 349 c 408 g 269 t
ORIGIN
1 gtacgctacc acagcttctc gtccgcgtcg agattacagc cacggccttc aggagtgacc
61 atagacgaat cctttctcac agaagacaag agcacccaga atcgcaagct tcttcagaaa
121 cgaaggacgc tggtgaccaa actgaggaag aacttggctg aggagtacct gcactacctc
181 agtgagcgag atgcctgtaa gatcctcatc gcagacctga atgagctgcg gtaccagcgg
241 gaggacatgt cattagccca gtcgccaggc atctgggggg aggaccctgt gaagttaacc
301 ctggctctta agatgacccg gcaagacctg acccgcacgc agatggaact caacaacatg
361 aaggccaact ttggagatgt ggtccccagg agggactttg aaatgcagga gaagaccaac
421 aaggatcttc aggagcagct ggacaccctg agagccagct acgaggaggt tcgcaaggag
481 catgagatcc tcatgcagct gcacatgagc acgctgaagg aacgggacca attcttctct
541 gagctgcagg agatccagcg cacttccacg ccgcggcctg actggaccaa gtgcaaagat
601 gtggtggctg ggggcccaga gcgctggcag atgctggctg agggcaagaa cagcgaccag
661 ctggtggacg tgctcctgga agagattggt tcggggctgc tgcgggagaa agacttcttc
721 cctggtctgg gctatgggga agccatccct gcttttcttc ggtttgatgg cctcgtggag
781 aacaagaagc caagcaagaa ggacgtggtc aacctcctca aggatgcctg gaaggaacgt
841 cttgctgagg agcagaaaga gacgttccca gatttcttct tcaatttcct ggagcatcgc
901 tttgggccca gtgatgccat ggcctgggct tatactattt ttgaaaatat caagatcttc
961 cactccaacg aggttatgag tcagttctat gcagtcttga tgggaaagcg gagtgagaat
1021 gtgtatgtca cccagaagga gacagtagcc cagctgctga aggagatgac aaatgctgac
1081 agtcagaacg aggggctact aaccatggag cagttcaaca ctgtcctcaa gagtaccttc
1141 cctctcaaga cagaagagca aatccaggag ctgatggagg cagggggctg gcatcccagc
1201 agcagcaatg cagacttgct caactaccgc tcactgttta tggaggatga ggagggccag
1261 agtgagccct ttgtgcaaaa accctggctc ttaagatgac ccggcaagac ctgacccgca
1321 cgcagatgga actcaacaac atgaaggcca actttggaga tgtggtcccc aggagggact
1381 ttgaaatgca ggagaagac
//