LOCUS AK302235 1626 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57011 complete cds, highly similar to Homo
sapiens cancer susceptibility candidate 1 (CASC1), mRNA.
ACCESSION AK302235
VERSION AK302235.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1626)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1626
/clone="TESTI2040864"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496859"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 49..1416
/codon_start=1
/note="highly similar to Homo sapiens cancer
susceptibility candidate 1 (CASC1), mRNA"
/protein_id="BAG63589.1"
/transl_table=1
/translation="MSGSKKKKVTKAERLKLLQEEEERRLKEEEEARLKYEKEEMERL
EIQRIEKEKWHRLEAKDLERRNEELEELYLLERCFPEAEKLKQETKLLSQWKHYIQCD
GSPDPSVAQEMNTFISLWKEKTNETFEEVIEKSKVVLNLIEKLKFILLETPPCDLQDK
NIIQYQESILQLQELLHLKFGVATEILLKQASTLADLDSGNMEKVIKDENVTLYVWAN
LKKNPRHRSVRFSETQIGFEIPRILATSDIAVRLLHTHYDHVSALHPVSTPSKEYTSA
VTELVKDDVKNVEKAISKEVEEESKQQERGSHLIQEEEIKVEEEQGDIEVKMSSAEEE
SEAIKCEREMKVLSETVSAAQLLLVENSSEKPDFFEDNVVDLCQFTTLGGVYHLDILE
LPPQCKPVKGWMIVEILKEGLQKYTYPPETTEEFETENAFPPIEVTLEVHENVIFFED
PVVVR"
BASE COUNT 590 a 262 c 364 g 410 t
ORIGIN
1 aatttctgct ccgactctgc ggactactgc agtggagctt gactcttaat gtctggcagt
61 aagaaaaaga aagtcaccaa agctgaacga ttgaagctgc tacaagagga ggaggagaga
121 cgactgaaag aggaagagga agcccgtttg aaatatgaga aagaagaaat ggaaaggctt
181 gaaatacagc gaattgagaa agaaaaatgg catcgacttg aagcaaaaga tctagaaagg
241 agaaatgaag aacttgaaga actttattta ttagagaggt gttttcctga agcagagaaa
301 ttgaaacagg aaactaaatt gctttctcag tggaagcact acattcaatg tgatgggagt
361 cctgatcctt cagtagccca agaaatgaac acgtttatta gtttgtggaa agagaaaaca
421 aatgagactt ttgaggaagt gattgagaag agtaaagtag tgctaaattt aattgagaaa
481 ttgaaattta ttttactgga aactccacca tgtgatttgc aagataaaaa tataatacag
541 taccaagaat caatactaca actgcaggag ctccttcatc ttaaattcgg tgtagccaca
601 gaaatacttc tcaaacaagc tagtactttg gcagatctgg acagtggaaa tatggaaaaa
661 gtcattaaag atgaaaatgt tactctgtat gtgtgggcaa acctcaagaa gaatccaagg
721 cacagaagtg ttagattctc tgaaacacaa attggatttg agattccaag gatattagca
781 acaagtgaca ttgctgtacg actcctgcat acccactatg atcatgtttc tgcactgcac
841 cctgtttcaa caccatcaaa agaatacact tctgcagtaa ctgagcttgt caaagatgat
901 gttaagaatg tagaaaaagc aatcagcaag gaggtcgaag aagagtccaa acaacaagaa
961 agagggtctc acttaattca ggaggaagaa ataaaagttg aggaggaaca aggtgatatt
1021 gaagtgaaaa tgagttctgc tgaggaagaa tctgaagcca taaaatgtga acgagagatg
1081 aaagtattaa gtgaaactgt ttcagcagca cagttgttgc tggtagagaa ttcttctgaa
1141 aagccagatt tctttgaaga caatgtggtg gatttatgcc agttcacaac tctgggtgga
1201 gtataccact tggatatttt ggagcttcct ccacagtgta aaccagtgaa gggatggatg
1261 attgtggaaa tactcaaaga aggattacag aaatacacat atcctccgga aactacagaa
1321 gagtttgaga cagaaaatgc tttcccacct atagaggtca cacttgaggt tcatgagaat
1381 gtaatctttt ttgaggatcc tgtggttgta aggtaaacat tggagaactg atggcatcag
1441 caatgtatcc tacaaaccaa aagaaagact tgtaacattc agcctggaca cctttggccc
1501 tgttaccttg attcaagatg ctcatattaa catgccgtac cagtcatggg aactaagacc
1561 acttgatgta aataaagtac ttttaactgt gactacagta tttactgaga ttcaaataca
1621 aattaa
//