LOCUS AK302228 1877 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59783 complete cds, highly similar to Homo
sapiens sterile alpha motif domain containing 3 (SAMD3),
transcript variant 1, mRNA.
ACCESSION AK302228
VERSION AK302228.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1877)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1877
/clone="TESTI2040213"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496852"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 41..1675
/codon_start=1
/note="highly similar to Homo sapiens sterile alpha motif
domain containing 3 (SAMD3), transcript variant 1, mRNA"
/protein_id="BAG63582.1"
/transl_table=1
/translation="MRSSKLQSPSPSQEKQGVYLQETAMETWSVEQVCSWLVEKNLGE
LVHRFQEEEVSGAALLALNDRMVQQLVKKIGHQAVLMDLIKKYKQNTQGLKSPENPKK
AALVMQTEAARDYRDEESSSPARHGEQMPSFYPAENLDNGLIDQRVLKQRRNVKQILA
RSKALQWTKSYVLPEFPYDVKCMLAEQKCPDHSMRIRIIEFLQADMTKYLEGSLYPST
QQYNDVVNALLQAHPFLDEDGCGFFLWKRALKDRFKYVRRPIEDDEQVIRNKCKFGHR
RGQTRKSLADIRFDEIKLVQIKEVAVCFDSELDEHIKWFQQEYVKTEKDWREIDKRMS
QTLEIRRKMIGSRTPLKDILKLFPFLKCPYQMFREFQLLTRTDIYKKTRHILESYSEN
ILTSFSVVDNPINIVLQEKMKHYTDEDMLKYMKMTATCLLLPDVFGDDPSLFVIMNEQ
VQVSTPVLEVKNPFNMEVCEFSLYLERERLTKVDDCVTALAALVAAFHVFRIECPRRL
SQTFNFLETLIFDMHSPYFPSLKEKENEVGFQHPLT"
BASE COUNT 611 a 344 c 415 g 507 t
ORIGIN
1 atatgtgggt cctacttcct cttcttgcta acggaaaaca atgagaagca gcaagttaca
61 atctccttct cctagccagg agaagcaagg ggtgtattta caggagacag caatggaaac
121 ctggtcagtt gagcaggtct gcagttggtt ggtggagaaa aatttaggag agctagttca
181 tagatttcaa gaggaagaag taagtggggc cgctcttctt gcacttaatg atcggatggt
241 tcagcaactg gtaaagaaaa ttgggcacca ggctgttctg atggatttaa ttaaaaaata
301 caagcagaac actcaaggac tgaagtcccc agaaaacccc aaaaaggcag ccctggtcat
361 gcaaacagaa gcagctcgag attacaggga tgaagagtcc tccagtccag ccaggcatgg
421 ggagcagatg ccatctttct atccagctga aaaccttgat aatggactaa ttgaccaaag
481 agtattgaaa cagagaagaa atgtgaaaca aattctagca agaagcaaag cattacagtg
541 gacgaagtcc tatgttttac cagagtttcc ctatgatgtc aaatgcatgt tagcagagca
601 gaagtgcccg gatcacagca tgaggataag gatcattgag tttctccagg ccgacatgac
661 taagtatctg gaaggctcac tgtaccccag cacccagcag tacaatgacg tggttaatgc
721 cctgctgcag gcccaccctt tcctggatga ggatggctgt ggcttctttt tatggaaacg
781 agccctcaaa gatcgcttta aatatgttcg aagacccata gaagatgatg agcaagtgat
841 tagaaataag tgtaaatttg gacaccgaag aggccagaca aggaaatctc ttgctgatat
901 aagatttgat gaaattaaac ttgtccagat aaaagaagta gctgtttgtt ttgattctga
961 gctagatgaa catattaagt ggttccagca agaatacgtg aaaacagaaa aggactggag
1021 agaaattgac aagagaatga gccaaacttt ggaaataaga agaaagatga ttggcagccg
1081 aacacctctg aaggacattc ttaaactgtt tcctttcttg aagtgccctt atcagatgtt
1141 cagagaattc caacttctta caagaacaga tatttataag aaaacaaggc acattttgga
1201 atcctattca gaaaatatac tgacttcttt ttcagtggtg gacaatccaa tcaatattgt
1261 attgcaagaa aaaatgaaac attacacaga tgaagacatg ttgaaataca tgaagatgac
1321 agccacatgt ttactcctcc cagatgtttt tggggatgat cccagccttt ttgtcatcat
1381 gaatgaacag gtgcaagtgt ccacacctgt gttggaagtt aaaaaccctt tcaacatgga
1441 ggtctgcgaa ttttctttat atttagaaag ggagaggctc acaaaggtgg acgactgtgt
1501 tacagccttg gctgcgctag tagctgcctt tcatgtattt aggattgagt gtccaagaag
1561 actgtcccaa actttcaact tcctagaaac gctgattttc gatatgcaca gtccttattt
1621 tccttctttg aaagaaaagg aaaacgaagt aggatttcag cacccactca cttaatagca
1681 tgccaaatat tgtactggaa tttacctctg ggaaaactga agcttcataa gaaattgttt
1741 tgatttaggg ttgtggtaga ggtaggtatg agaaaatcat cttgtattta tagatgctaa
1801 tgaatttcaa tgctttctat ctttacactt agatattaag ttctttgtga aattctgtaa
1861 taaaattcta cttcatt
//