LOCUS AK302197 1971 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58644 complete cds, highly similar to Fragile
X mental retardation syndrome-related protein 1.
ACCESSION AK302197
VERSION AK302197.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1971)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1971
/clone="TESTI2038032"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496821"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 59..1885
/codon_start=1
/note="highly similar to Fragile X mental retardation
syndrome-related protein 1"
/protein_id="BAG63558.1"
/transl_table=1
/translation="MVTEGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKK
EISEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPV
NQNKTVKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSA
SEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMG
LAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVP
RNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNV
QVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSEL
SNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKS
SISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGM
TESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKA
INGPTSASGDDISKLQRTPGEEKINTLKEENTQEAAVLNGVS"
BASE COUNT 661 a 330 c 480 g 500 t
ORIGIN
1 atttagcgta gaagcaattt aattttaatt agtttttttc caatttagaa gataatacat
61 ggtcactgag ggatttatca aagatgttca tgaagactcc cttacagttg tttttgaaaa
121 taattggcaa ccagaacgcc aggttccatt taatgaagtt agattaccac caccacctga
181 tataaaaaaa gaaattagtg aaggagatga agtagaggta tattcaagag caaatgacca
241 agagccatgt gggtggtggt tggctaaagt tcggatgatg aaaggagaat tttatgtcat
301 tgaatatgct gcttgtgacg ctacttacaa tgaaatagtc acatttgaac gacttcggcc
361 tgtcaatcaa aataaaactg tcaaaaaaaa taccttcttt aaatgcacag tggatgttcc
421 tgaggatttg agagaggcgt gtgctaatga aaatgcacat aaagatttta agaaagcggt
481 aggagcatgc agaatttttt accatccaga aacaacacag ctaatgatac tgtctgccag
541 tgaagcaact gtgaagagag taaacatctt aagtgacatg catttgcgaa gtattcgtac
601 gaagttgatg cttatgtcca gaaatgaaga ggccactaag catttagaat gcacaaagca
661 acttgcagca gcttttcatg aggaatttgt tgtgagagaa gatttaatgg gcctggcaat
721 aggaacacat ggtagtaaca tccagcaagc taggaaggtt cctggagtta ccgccattga
781 gctagatgaa gatactggaa cattcagaat ctacggagag agtgctgatg ctgtaaaaaa
841 ggctagaggt ttcttggaat ttgtggagga ttttattcag gttcctagga atctcgttgg
901 aaaagtaatt ggaaaaaatg gcaaagttat tcaagaaata gtggacaaat ctggtgtggt
961 tcgggtgaga attgaagggg acaatgaaaa taaattaccc agagaagacg gtatggttcc
1021 atttgtattt gttggcacta aagaaagcat tggaaatgtg caggttcttc tagagtatca
1081 tattgcctat ctaaaggaag tagaacagct aagaatggaa cgcctacaga ttgatgaaca
1141 gctgcgacag attggttcta ggtcttatag cggaagaggc agaggtcgtc ggggacctaa
1201 ttacacctcc ggttatggta caaattctga gctgtctaac ccctctgaaa cggaatctga
1261 gcgtaaagac gagctgagtg attggtcatt ggcaggagaa gatgatcgag acagccgaca
1321 tcagcgtgac agcaggagac gcccaggagg aagaggcaga agtgtttcag ggggtcgagg
1381 tcgtggtgga ccacgtggtg gcaaatcctc catcagttct gtgctcaaag atccagacag
1441 caatccatac agcttacttg ataatacaga atcagatcag actgcagaca ctgatgccag
1501 cgaatctcat cacagtacta accgtcgtag gcggtctcgt agacgaagga ctgatgaaga
1561 tgctgttctg atggatggaa tgactgaatc tgatacagct tcagttaatg aaaatgggct
1621 agtcacagtt gcagattata tttctagagc tgagtctcag agcagacaaa gaaacctccc
1681 aagggaaact ttggctaaaa acaagaaaga aatggcaaaa gatgtgattg aagagcatgg
1741 tccttcagaa aaggcaataa acggcccaac tagtgcttct ggcgatgaca tttctaagct
1801 acagcgtact ccaggagaag aaaagattaa taccttaaaa gaagaaaaca ctcaagaagc
1861 agcagtcctg aatggtgttt cataaactga agaagttcct agtttacagt tcttttacat
1921 tacatttaca atagtgcttg tacaagcttg ccaaagatag aatatggatc g
//