LOCUS AK302154 1593 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51638 complete cds, moderately similar to
Splicing factor 3B subunit 4.
ACCESSION AK302154
VERSION AK302154.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1593)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1593
/clone="TESTI2034727"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496778"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 587..1369
/codon_start=1
/note="moderately similar to Splicing factor 3B subunit 4"
/protein_id="BAG63525.1"
/transl_table=1
/translation="MNGQYLCNHPITVSYAFEKDSKGERHGLAAGRLLAAQNPLSQPD
RPHQLFADAPPSPSAPNPVVSSLGSGLPPPGMPPPGSFPPPVLPPGALPPGIPPAMPH
HLCLLGLQDMAPHRQEPQGQDILVMDTPKLTHSHQEECPIQGCSDAAGTPWTSWFRTS
PFWTPRLWGTATTPTTTWNALSWTSSNGHAPPKASILISHGSPRSYASTWYAWTSSTD
APHGYTGPPQPTPYGYQPLPPTRPTPQPPVAPRGPLWSPLPQ"
BASE COUNT 375 a 495 c 349 g 374 t
ORIGIN
1 aagtggttag ttgcctgctg agtagacata aacacctgct aaagaaatgt gaaaagagtg
61 gaaacgtgct atttggaggt tattttccta gtcgacatcc aggagatctc cagagatcta
121 tttcagcccc acctgttgat ttcatcatga aaaggaggaa gctcaaactg aagtgagtta
181 aaaacttcat ctcctagaga ggactgtggc tcggcctgag ttgagttttt ttatgtttat
241 gtgcaagcgc aatgaagaag aacaccagca agactaccat gaggatcaat aagcaagatg
301 ctctctgcac cccacactcc catgatccga gagatcttca aaatatgttg gatggaggag
361 agtatgcccc ttttgtatct cctcccatgt tagagagcaa ttttatccag aagctgctca
421 gctgatttca cagaggggtg acaagggagg acaacagaca cttcaaaagg caagaagagg
481 atggcaggag ctcttttgcc atggctacca ggccgatctc cgagcggaac caggatgcca
541 ctgtgtacgt ggggggcctg aatgagaagt tgcagcaatt gaagccatga atgggcagta
601 cctctgtaac caccctatca ccgtatctta tgccttcgag aaggactcca agggtgagcg
661 ccatggctta gcagctggac gacttctggc agctcagaac ccgctctccc agcctgaccg
721 ccctcatcag ctgtttgcag atgcacctcc ttcaccctct gcccccaatc ctgtggtatc
781 atcattgggg tctgggcttc ctccaccagg catgcctcct cctggctcct tcccaccccc
841 agtgctgcct cctggagccc tcccacctgg gataccccca gccatgcccc accacctatg
901 cctcctgggg ctgcaggaca tggcccccca tcggcaggaa ccccaggggc aggacatcct
961 ggtcatggac actcccaagc tcacccattc ccaccaggag gagtgcccca tccagggatg
1021 ttcagatgca gctggcacgc catggacctc atggtttagg acatccccat tctggacacc
1081 caggctctgg gggacagcca ccaccccaac caccacctgg aatgccttat cctggacctc
1141 ctccaatggg catgcccccc cgaaggcctc cattctgatc tcccatgggt cacccaggtc
1201 ctatgcctcc acatggtatg cgtggacttc ctccactgat gccccccatg gatacactgg
1261 ccctccacaa cccacaccct atggctacca gcctctccct ccaaccaggc ccactcccca
1321 gccaccagtt gcccctcgag gcccgctttg gagccctctc cctcagtaaa ttcacatttt
1381 ccttcctcct attacatctt cccaatatct tttcgatacc ttggaccaat cagagatgct
1441 gtagctcctt ggggctaagg cactaatccc tttcagcacc cccaccccat tccccttttt
1501 aatgtaactt tttccacagg aggtatttct tttttatgtt ggtcctgagt attttgcaaa
1561 tgcacagaga aaataaaact aaactccttg ttt
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