LOCUS AK302086 1721 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58815 complete cds, highly similar to
2-hydroxyphytanoyl-CoA lyase (EC 4.1.-.-).
ACCESSION AK302086
VERSION AK302086.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1721)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1721
/clone="TESTI2028498"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496710"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 107..1663
/codon_start=1
/note="highly similar to 2-hydroxyphytanoyl-CoA lyase (EC
4.1.-.-)"
/protein_id="BAG63473.1"
/transl_table=1
/translation="MPDSNFAERSEEQVSGAKVIAQALKTQDVEYIFGIVGIPVTEIA
IAAQQLGIKYIGMRNEQAACYAASAIGYLTSRPGVCLVVSGPGLIHALGGMANANMNC
WPLLVIGGSSERNQETMGAFQEFPQAVRSSIYGRPGACYVDIPADFVNLQVSVNSIKY
MERCMSPPISMAETSAVCTAASVIRNAKQPLLIIGKGAAYAHAEESIKKLVEQYKLPF
LPTPMGKGVVPDNHPYCVGAARSRALQFADVIVLFGARLNWILHFGLPPRYQPDVKFI
QVDICAEELGNNVKPAVTLLGNIHAVTKQELASKKSLPMNYYTVFYHVQEQLPRDCFV
VSEGANTMDIGRTVLQNYLPRHRLDAGTFGTMGVGLGFAIAAAVVAKDRSPGQWIICV
EGDSAFGFSGMEVETICRYNLPIILLVVNNNGIYQGFDTDTWKEMLKFQDATAVVPPM
CLLPNSHYEQVMTAFGGKGYFVQTPEELQKSLRQSLADTTKPSLINIMIEPQATRKAQ
DFHWLTRSNM"
BASE COUNT 453 a 363 c 437 g 468 t
ORIGIN
1 agaggtgcag taccagaggt ggcgtgctgc cgacttcgcg tttgccttgc tggatgattc
61 cgcttgtttg ccggctgcgt gagtgcttag agcttttcgg tggaagatgc cggacagtaa
121 cttcgcagag cgcagcgagg agcaggtgtc tggtgctaaa gtcatcgctc aggccctgaa
181 aacgcaagat gtggagtaca tatttggcat cgtaggcatc ccagtgaccg aaatcgccat
241 tgctgcccag cagctaggca tcaagtacat cgggatgagg aatgagcaag cggcttgtta
301 tgctgcctcc gcgattggat atctgacaag caggccagga gtctgccttg ttgtttctgg
361 cccaggtctc atccatgcct tgggcggtat ggcaaatgca aacatgaact gctggccctt
421 gcttgtgatt ggtggttcct ctgaaagaaa ccaagaaaca atgggagctt tccaggagtt
481 tcctcaggca gtgagaagca gtatctatgg tcgtccaggt gcttgctatg ttgacatacc
541 agcagatttt gtgaaccttc aggtgagtgt gaattctata aagtacatgg aacgctgcat
601 gtcacctcct attagcatgg cagaaacctc tgctgtgtgc acggcggctt ctgttattag
661 gaatgccaaa caaccccttc ttatcatcgg gaaaggtgct gcttacgctc atgcagaaga
721 gagtatcaag aaattggtgg agcaatataa actgccattt ttgcccaccc ctatggggaa
781 gggtgttgtc cctgacaacc atccatactg tgtaggtgca gccagatcca gggctttgca
841 atttgctgat gtaattgtgt tatttggtgc cagactaaat tggattttac attttggact
901 gcctccaaga tatcagccag atgtgaagtt tatccaggtt gatatctgtg cagaagaatt
961 ggggaataat gtaaagcccg ctgttacttt gctaggaaac atacatgctg tcactaagca
1021 ggaactagct tctaaaaaat ccctgcctat gaattattac acagtattct accatgttca
1081 agaacaacta cctagagact gtttcgtggt aagtgaagga gcaaatacta tggacattgg
1141 acggactgtg cttcagaact accttcctcg tcacaggctt gatgctggta ctttcggaac
1201 aatgggagtt ggtttgggat ttgctattgc agctgccgtg gtggctaaag atagaagccc
1261 tgggcaatgg atcatctgtg tggaaggaga cagtgcattt gggttttctg gcatggaggt
1321 agaaaccatc tgcaggtaca acttgccaat catactgttg gtagtgaata acaatggaat
1381 ttaccaaggt tttgatacag atacttggaa agaaatgtta aaatttcaag atgctactgc
1441 agtggtccct ccaatgtgtt tgctgccaaa ttcacattat gagcaagtca tgactgcatt
1501 tggaggcaaa gggtattttg tacaaacacc agaagaactc caaaaatccc tgaggcagag
1561 cctagcagac acaactaaac cttctcttat caacatcatg attgagccac aagccacacg
1621 gaaggcccag gattttcatt ggctgacccg ctctaatatg taaataaaga cgccagttgg
1681 tggtcttgag ttttctcttt cttgcaagat gaaattttat t
//