LOCUS AK302021 1828 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57656 complete cds, highly similar to U3
small nucleolar RNA-associated protein 15 homolog.
ACCESSION AK302021
VERSION AK302021.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1828)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1828
/clone="TESTI2022547"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496645"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 224..1723
/codon_start=1
/note="highly similar to U3 small nucleolar
RNA-associated protein 15 homolog"
/protein_id="BAG63420.1"
/transl_table=1
/translation="MAGYKPVAIQTYPILGEKITQDTLYWNNYKPPYNYAVTASSRIH
IYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGH
TKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDL
FITGSYDHTVKMFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKG
GQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSL
ALAHEDETIVVGMTNGILSVKHRKSEAKKESLPRRRRPAYRTFIKGKNYMKQRDDILI
NRPAKKHLELYDRDLKHFRISKALDRVLDPTCTIKTPEITVSIIKELNRRGVLANALA
GRDEKEISHVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQSPVVDKKFLLLQGL
VEKEIDYQRELLETLGMMDMLFATMRRKEGTSVLEHTSDGFPENKKIES"
BASE COUNT 561 a 326 c 416 g 525 t
ORIGIN
1 gtgtgtgtcg ccggctcctt gagggtccat gtgattttta cgccagtgct gctgaactgt
61 gcagggtagg gagctggcac agtccgatta attgtccttg ggtcgaggtg tctcgtcgga
121 ccctttgggg ctcagtggag aattaaggca gagtcactgt aattatttct aataccaatt
181 ccaaaatagt gactcttgga caatagtgca attatatgga attatggctg gttataagcc
241 tgtagctatt cagacatatc ctatacttgg tgaaaaaatc acccaagata cactgtactg
301 gaacaactat aagcctccat ataattatgc tgtcacagct tcctcaagaa ttcacattta
361 tggccgatac tcccaagaac ctataaaaac cttttctcga tttaaagaca cagcatactg
421 tgctactttt cgacaagatg gtagattgct tgtggctggc agtgaagatg gtggagttca
481 actttttgat ataagtggga gggctcccct caggcagttt gaaggccata caaaagcagt
541 tcatacagta gattttacag ctgacaaata tcacgtggtc tctggggctg atgattatac
601 agttaaatta tgggatattc caaactccaa agaaattttg acatttaaag aacactctga
661 ttatgtgagg tgtggatgtg ctagcaaact taatccggat ctctttataa caggatcata
721 tgatcatact gtgaagatgt ttgatgcacg aacgagtgag agtgttctct ccgttgagca
781 tgggcagcca gtggagagtg tcctactttt cccctctgga ggtcttctgg tgtcagcagg
841 aggtcgttat gttaaagtct gggacatgtt aaaaggagga caattgctag tatctttgaa
901 aaatcatcac aaaaccgtga catgtttatg tctaagcagc tctggacaga ggttactctc
961 tggctcactg gataggaagg tgaaagtata cagcacaact tcctacaaag tagtccacag
1021 ttttgattat gcagcttcaa ttttgagtct tgcccttgca catgaagatg agacaatagt
1081 tgtaggaatg accaatggaa tactgagtgt taaacatcgg aaatctgaag caaagaagga
1141 atcacttccc agaagaagaa ggcctgcata tcgaaccttt attaaaggaa aaaattacat
1201 gaagcaacgg gatgacattt tgattaacag gccagcaaag aagcacctag aattgtatga
1261 cagggatctg aaacattttc ggatctctaa ggcactcgat agagttcttg atcccacttg
1321 tacaataaag acacccgaga ttacggtgtc catcataaag gagttaaatc gaagaggagt
1381 ccttgcaaat gcgcttgcag gtcgggatga gaaggaaatc agtcatgttc ttaatttttt
1441 gataaggaat ctttctcagc caagatttgc ccctgtttta atcaatgctg ctgaaataat
1501 tattgatata tatctgcctg taattggtca gtcccctgta gttgataaaa agtttttact
1561 acttcaagga cttgtagaaa aagagattga ttaccaaaga gaattgttag aaaccttggg
1621 gatgatggat atgctttttg ccaccatgag aaggaaggaa ggcacttctg tgttggaaca
1681 cacatctgat ggatttccag agaataagaa gatagaatca tagtgtctgc taaataagac
1741 atataagaac tctgaagttg gaatagattt gactgtatta aatgttggcg agagactctc
1801 tttgatacat taaaaaaact gtttgcag
//