LOCUS AK302015 3360 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ58079 complete cds, highly similar to Homo
sapiens SH3 multiple domains 1 (SH3MD1), mRNA.
ACCESSION AK302015
VERSION AK302015.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3360)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3360
/clone="TESTI2022271"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496639"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 68..2965
/codon_start=1
/note="highly similar to Homo sapiens SH3 multiple
domains 1 (SH3MD1), mRNA"
/protein_id="BAH13608.1"
/transl_table=1
/translation="MPVTATGKILFRRSHIRDVAVKRLKPIDEYCRALVRLPPHISQC
DEVFRFFEARPEDVNPPKEDYGSSKRKSGADATAEPMILEQYVVVSNYKKQENSELSL
QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEVSKRRK
AHLRRLDRRWTLGGMVNRQHSREEKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGW
WYIRYLGKEGWAPASYLKKAKDDLPTRKKNLAGPVEIIGNIMEISNLLNKKASGDKET
PPAEGEGHEAPIAKKEISLPILCNASNGSAVGVPDRTVSRLAQGSPAVARIAPQRAQI
SSPNLRTRPPPRRESSLGFQLPKPPEPPSVEVEYYTIAEFQSCISDGISFRGGQKAEV
IDKNSGGWWYVQIGEKEGWAPASYIDKRKKPNLSRRTSTLTRPKVPPPAPPSKPKEAE
EGPTGASESQDSPRKLKYEEPEYDIPAFGFDSEPELSEEPVEDRASGERRPAQPHRPS
PASSLQRARFKVGESSEDVALEEETIYENEGFRPYAEDTLSARGSSGDSDSPGSSSLS
LTRKNSPKSGSPKSSSLLKLKAEKNAQAEMGKNHSSASFSSSITINTTCCSSSSSSSS
SLSKTSGDLKPRSASDAGIRGTPKVRAKKDADANAGLTSCPRAKPSVRPKPFLNRAES
QSQEKMDISTLRRQLRPTGQLRGGLKGSKSEDSELPPQTASEAPSEGSRRSSSDLITL
PATTPPCPTKKEWEGPATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVRFG
ELEGWAPSHYLVLDENEQPDPSGKELDTVPAKGRQNEGKSDSLEKIERRVQALNTVNQ
SKKATPPIPSKPPGGFGKTSGTPAVKMRNGVRQVAVKPIEKSQFIHNNLKDVYVSIAD
YEGDEETAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKN"
BASE COUNT 791 a 1003 c 1013 g 553 t
ORIGIN
1 gacaccacaa ggactgggag tggaagatgc cttctccagg gggaaattag gtagactgag
61 gcaacagatg cccgttacag ctacaggcaa gatcctcttc cgcagaagcc acatccggga
121 cgtagctgtg aagagactga agcccatcga tgaatactgc cgggcacttg tccggctgcc
181 cccccacatc tcacagtgtg acgaagtctt ccggttcttc gaggctcgac ccgaggatgt
241 caaccctcca aaagaggact atggcagttc caagaggaaa tcaggtgccg acgccaccgc
301 cgagcccatg atcctggaac agtacgtggt ggtgtccaac tataagaagc aggagaactc
361 ggagctgagc ctccaggccg gggaggtggt ggatgtcatc gagaagaacg agagcggctg
421 gtggttcgtg agcacttctg aggagcaggg ctgggtccct gccacctacc tggaggccca
481 gaatggtact cgggatgact ccgacatcaa cacctctaag actggagaag tgtccaagag
541 acgcaaggcc catctgcggc gcctggatcg ccggtggacc ctgggcggga tggtcaacag
601 gcagcacagc cgagaggaga agtatgtcac cgtgcagcct tacaccagcc aaagcaagga
661 cgagattggc tttgagaagg gcgtcacagt ggaggtgatc cggaagaatc tggaaggctg
721 gtggtatatc agatacctgg gcaaagaggg ctgggcgcca gcatcctacc tgaagaaggc
781 caaggatgac ctgccaaccc ggaagaagaa cctggccggc ccagtggaga tcattgggaa
841 catcatggag atcagcaacc tgctgaacaa gaaggcgtct ggggacaagg aaactccacc
901 agccgaaggc gagggccatg aggcccccat tgccaagaag gagatcagcc tgcccatcct
961 ctgcaatgcc tccaatggca gtgccgtggg cgttcctgac aggactgtct ccaggctggc
1021 ccagggctct ccagctgtgg ccaggattgc ccctcagcgg gcccagatca gctccccgaa
1081 cctacggaca agacctccac cacgcagaga atccagcctg gggttccaac tgccaaagcc
1141 accagagccc ccttctgttg aggtggagta ctacaccatt gccgaattcc agtcgtgcat
1201 ttccgatggc atcagctttc ggggtggaca gaaggcagag gtcattgata agaactcagg
1261 tggctggtgg tacgtgcaga tcggtgagaa ggagggctgg gcccccgcat catacatcga
1321 taagcgcaag aagcccaacc tgagccgccg cacaagcacg ctgacccggc ccaaggtgcc
1381 cccgccagca ccccccagca agcccaagga ggccgaggag ggccctacgg gggccagtga
1441 gagccaggac tccccgcgga agctcaagta tgaggagcct gagtatgaca tccctgcatt
1501 cggctttgac tcagagcctg agctgagcga ggagcccgtg gaggacagag cctcagggga
1561 gaggcggcct gcccagcccc accggccctc gccggcctct tctctgcagc gggcccgctt
1621 caaggtgggt gagtcttcag aggatgtggc cctggaagag gagaccatct atgagaatga
1681 gggcttccgg ccatatgcag aggacaccct gtcagccaga ggctcctccg gggacagcga
1741 ctccccaggc agctcctcgc tgtccctgac caggaaaaac tcccccaaat caggctcccc
1801 caagtcatca tcactcctaa agctcaaggc agagaagaat gcccaggcag aaatggggaa
1861 gaaccactcc tcagcctcct tttcctcatc catcaccatc aacaccactt gctgctcctc
1921 ctcttcctcc tcctcctctt ccttgtccaa aaccagtggc gacctgaagc cccgctctgc
1981 ttcggacgca ggcatccgcg gcactcccaa ggtcagggca aagaaggatg ctgatgcgaa
2041 cgctgggctg acctcctgtc cccgggccaa gccatcggtc cggcccaagc cattcctaaa
2101 ccgagcagag tcgcagagcc aagagaagat ggacatcagc actttacggc gccagctgag
2161 acccacaggc cagctccgtg gagggctcaa gggctccaag agtgaggatt cggagctgcc
2221 cccgcagacg gcctccgagg ctcccagtga ggggtctagg agaagctcat ccgacctcat
2281 caccctccca gccaccactc ccccatgtcc caccaagaag gaatgggaag ggccagccac
2341 ctcgtacatg acatgcagcg cctaccagaa ggtccaggac tcggagatca gcttccccgc
2401 gggcgtggag gtgcaggtgc tggagaagca ggagagcggg tggtggtatg tgaggtttgg
2461 ggagctggag ggctgggccc cttcccacta tttggtgctc gatgagaacg agcaacctga
2521 cccctctggc aaagagctgg acacagtgcc cgccaagggc aggcagaacg aaggcaagtc
2581 agacagcctg gagaagatcg agaggcgtgt ccaagcactg aacaccgtca accagagcaa
2641 gaaggccacg ccccccatcc cctccaaacc tcccgggggc ttcggcaaga cctcaggcac
2701 tccagcggtg aagatgagga acggagtgcg gcaggtggcg gtcaagccca tcgagaagtc
2761 tcagttcatc cacaataacc tcaaagatgt gtacgtctct atcgcagact acgaggggga
2821 tgaggagaca gcaggcttcc aggagggggt gtccatggag gttctggaga ggaaccctaa
2881 tggctggtgg tactgccaga tcctggatgg tgtgaagccc ttcaaaggct gggtgccttc
2941 caactacctt gagaaaaaga actagcagag ggcctgggct cttccagcct cagtgtgcct
3001 ctctggccgc ccactggatg agcggtatcc ctggtattgt cctaagctgt atttgtgaat
3061 tgtgctggtt tcctgggcat tgccacgcct accacagctg ggcagggctg gaagccttac
3121 gtatgaagca tggagaagca gccattgtcc ccactatggg cagagggggg acccggctgg
3181 ccccttgggt cagactggag ccaacaccgc cagccacccc ctctggcctg ctggcaatgc
3241 cacaggtgcc caagaagatg gaggatccct gtgccaggag ccaacctggt cttcccgagg
3301 gtcagtgccc cagtgaagac agaagcgaga gaatgaagtt ccctgtaggt cctctgtcag
//