LOCUS AK301990 1737 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54118 complete cds, highly similar to
2-hydroxyphytanoyl-CoA lyase (EC 4.1.-.-).
ACCESSION AK301990
VERSION AK301990.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1737)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1737
/clone="TESTI2020488"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496614"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 125..1615
/codon_start=1
/note="highly similar to 2-hydroxyphytanoyl-CoA lyase (EC
4.1.-.-)"
/protein_id="BAG63397.1"
/transl_table=1
/translation="MPDSNFAERSEEQVSGAKVIAQALKTQDVEYIFGIVGIPVTEIA
IAAQQLGIKYIGMRNEQAACYAASAIGYLTSRPGVCLVVSGPGLIHALGGMANANMNC
WYMERCMSPPISMAETSAVCTAASVIRNAKQPLLIIGKGAAYAHAEESIKKLVEQYKL
PFLPTPMGKGVVPDNHPYCVGAARSRALQFADVIVLFGARLNWILHFGLPPRYQPDVK
FIQVDICAEELGNNVKPAVTLLGNIHAVTKQLLEELDKTPWQYPPESKWWKTLREKMK
SNEAASKELASKKSLPMNYYTVFYHVQEQLPRDCFVVSEGANTMDIGRTVLQNYLPRH
RLDAGTFGTMGVGLGFAIAAAVVAKDRSPGQWIICVEGDSAFGFSGMEVETICRYNLP
IILLVVNNNGIYQGFDTDTWKEMLKFQDATAVVPPMCLLPNSHYEQVMTAFGGKGYFV
QTPEELQKSLRQSLADTTKPSLINIMIEPQATRKAQDFHWLTRSNM"
BASE COUNT 481 a 367 c 427 g 462 t
ORIGIN
1 gttgccctcc tgtccgtcag aggtgcagta ccagaggtgg cgtgctgccg acttcgcgtt
61 tgccttgctg gatgattccg cttgtttgcc ggctgcgtga gtgcttagag cttttcggtg
121 gaagatgccg gacagtaact tcgcagagcg cagcgaggag caggtgtctg gtgctaaagt
181 catcgctcag gccctgaaaa cgcaagatgt ggagtacata tttggcatcg taggcatccc
241 agtgaccgaa atcgccattg ctgcccagca gctaggcatc aagtacatcg ggatgaggaa
301 tgagcaagcg gcttgttatg ctgcctccgc gattggatat ctgacaagca ggccaggagt
361 ctgccttgtt gtttctggcc caggtctcat ccatgccttg ggcggtatgg caaatgcaaa
421 catgaactgc tggtacatgg aacgctgcat gtcacctcct attagcatgg cagaaacctc
481 tgctgtgtgc acggcggctt ctgttattag gaatgccaaa caaccccttc ttatcatcgg
541 gaaaggtgct gcttacgctc atgcagaaga gagtatcaag aaattggtgg agcaatataa
601 actgccattt ttgcccaccc ctatggggaa gggtgttgtc cctgacaacc atccatactg
661 tgtaggtgca gccagatcca gggctttgca atttgctgat gtaattgtgt tatttggtgc
721 cagactaaat tggattttac attttggact gcctccaaga tatcagccag atgtgaagtt
781 tatccaggtt gatatctgtg cagaagaatt ggggaataat gtaaagcccg ctgttacttt
841 gctaggaaac atacatgctg tcactaagca gcttttagag gaacttgata aaacaccatg
901 gcagtatcct ccagagagca agtggtggaa aactctgaga gaaaaaatga agagcaatga
961 agctgcatcc aaggaactag cttctaaaaa atccctgcct atgaattatt acacagtatt
1021 ctaccatgtt caagaacaac tacctagaga ctgtttcgtg gtaagtgaag gagcaaatac
1081 tatggacatt ggacggactg tgcttcagaa ctaccttcct cgtcacaggc ttgatgctgg
1141 tactttcgga acaatgggag ttggtttggg atttgctatt gcagctgccg tggtggctaa
1201 agatagaagc cctgggcaat ggatcatctg tgtggaagga gacagtgcat ttgggttttc
1261 tggcatggag gtagaaacca tctgcaggta caacttgcca atcatactgt tggtagtgaa
1321 taacaatgga atttaccaag gttttgatac agatacttgg aaagaaatgt taaaatttca
1381 agatgctact gcagtggtcc ctccaatgtg tttgctgcca aattcacatt atgagcaagt
1441 catgactgca tttggaggca aagggtattt tgtacaaaca ccagaagaac tccaaaaatc
1501 cctgaggcag agcctagcag acacaactaa accttctctt atcaacatca tgattgagcc
1561 acaagccaca cggaaggccc aggattttca ttggctgacc cgctctaata tgtaaataaa
1621 gacgccagtt ggtggtcttg agttttctct ttcttgcaag atgaaatttt attttccaca
1681 gcaaaattac tctactgtta aaattgtgca aaataaaata aacatttaaa atgaaac
//