LOCUS AK301843 2257 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51596 complete cds, highly similar to
BRCA1-associated RING domain protein 1.
ACCESSION AK301843
VERSION AK301843.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2257)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2257
/clone="TESTI2010140"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496467"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 388..2091
/codon_start=1
/note="highly similar to BRCA1-associated RING domain
protein 1"
/protein_id="BAG63286.1"
/transl_table=1
/translation="MWFSPRSKEVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPP
ADVSERAKKASARSGKKQKKKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVSFCSQP
SVISSPQINGEIDLLASGSLTESECFGSLTEVSLPLAEQIESPDTKSRNEVVTPEKVC
KNYLTSKKSLPLENNGKRGHHNRLSSPISKRCRTSILSTSGDFVKQTVPSENIPLPEC
SSPPSCKRKVGGTSGSKNSNMSDEFISLSPGTPPSTLSSSSYRRVMSSPSAMKLLPNM
AVKRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE
LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD
ESMKSLLLLPEKNESSSASHCSVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKA
KKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKVCEQEEKYE
IPEGPRRSRLNREHCQSCLMDATSICGEPSNTIQRTTLLSSSLQVGARSSVESPSQTV
T"
BASE COUNT 678 a 479 c 536 g 564 t
ORIGIN
1 agagcttggc cggtttcgag tcgctgacct gcagcttccc tgtggtttcc cgaggcctcc
61 ttgcttcccg ctctccgagg agcctttcat ccgaaggcgg gacgatgccg gataatcggc
121 agccgaggaa ccggcagccg aggatccgct ccgggaacga gcctcgttcc gcgcccgcca
181 tggaaccgga tggtcgcggt gcctgggccc acagtcgcgc cgcgctcgac cgcctggaga
241 agctgctgcg ctgctcgcgt tgtactaaca ttctgagaga gcctgtgtgt ttaggaggat
301 gtgagcacat cttctgtaga tttgaaagaa gataaaccta ggaaaagttt gtttaatgat
361 gcaggaaaca agaagaattc aattaaaatg tggtttagcc ctcgaagtaa ggaagtcaga
421 tatgttgtga gtaaagcttc agtgcaaacc cagcctgcaa taaaaaaaga tgcaagtgct
481 cagcaagact catatgaatt tgtttcccca agtcctcctg cagatgtttc tgagagggct
541 aaaaaggctt ctgcaagatc tggaaaaaag caaaaaaaga aaactttagc tgaaatcaac
601 caaaaatgga atttagaggc agaaaaagaa gatggtgaat ttgactccaa agaggaatct
661 aagcaaaagc tggtatcctt ctgtagccaa ccatctgtta tctccagtcc tcagataaat
721 ggtgaaatag acttactagc aagtggctcc ttgacagaat ctgaatgttt tggaagttta
781 actgaagtct ctttaccatt ggctgagcaa atagagtctc cagacactaa gagcaggaat
841 gaagtagtga ctcctgagaa ggtctgcaaa aattatctta catctaagaa atctttgcca
901 ttagaaaata atggaaaacg tggccatcac aatagacttt ccagtcccat ttctaagaga
961 tgtagaacca gcattctgag caccagtgga gattttgtta agcaaacggt gccctcagaa
1021 aatataccat tgcctgaatg ttcttcacca ccttcatgca aacgtaaagt tggtggtaca
1081 tcagggagca aaaacagtaa catgtccgat gaattcatta gtctttcacc aggtacacca
1141 ccttctacat taagtagttc aagttacagg cgagtgatgt ctagtccctc agcaatgaag
1201 ctgttgccca atatggctgt gaaaagaaat catagaggag agactttgct ccatattgct
1261 tctattaagg gcgacatacc ttctgttgaa taccttttac aaaatggaag tgatccaaat
1321 gttaaagacc atgctggatg gacaccattg catgaagctt gcaatcatgg gcacctgaag
1381 gtagtggaat tattgctcca gcataaggca ttggtgaaca ccaccgggta tcaaaatgac
1441 tcaccacttc acgatgcagc caagaatggg cacgtggata tagtcaagct gttactttcc
1501 tatggagcct ccagaaatgc tgttaatata tttggtctgc ggcctgtcga ttatacagat
1561 gatgaaagta tgaaatcgct attgctgcta ccagagaaga atgaatcatc ctcagctagc
1621 cactgctcag taatgaacac tgggcagcgt agggatggac ctcttgtact tataggcagt
1681 gggctgtctt cagaacaaca gaaaatgctc agtgagcttg cagtaattct taaggctaaa
1741 aaatatactg agtttgacag tacagtaact catgttgttg ttcctggtga tgcagttcaa
1801 agtaccttga agtgtatgct tgggattctc aatggatgct ggattctaaa atttgaatgg
1861 gtaaaagcat gtctacgaag aaaagtatgt gaacaggaag aaaagtatga aattcctgaa
1921 ggtccacgca gaagcaggct caacagagaa cattgccaaa gctgtttgat ggatgctact
1981 tctatttgtg gggaaccttc aaacaccatc caaaggacaa ccttattaag ctcgtcactg
2041 caggtggggg ccagatcctc agtagaaagc ccaagccaga cagtgacgtg actcagacca
2101 tcaatacagt cgcataccat gcgagacccg attctgatca gcgcttctgc acacagtata
2161 tcatctatga agatttgtgt aattatcacc cagagagggt tcggcagggc aaagtctgga
2221 aggctccttc gagctggttt atagactgtg tgatgtc
//