LOCUS AK301823 1876 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60933 complete cds, highly similar to TBC1
domain family member 3.
ACCESSION AK301823
VERSION AK301823.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1876)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1876
/clone="TESTI2008557"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496447"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 663..1562
/codon_start=1
/note="highly similar to TBC1 domain family member 3"
/protein_id="BAG63269.1"
/transl_table=1
/translation="MGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGE
QALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTR
KQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAP
RSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPW
FRHYDFRQSCWVRAISQEDQLAPCWQTEHPAERVRSAFAAPSTDSDQGTPFRARDEQQ
CAPTSGPCLCDLHLESSQFPPGF"
BASE COUNT 462 a 522 c 530 g 362 t
ORIGIN
1 agttacacac aggcagtggt atctgtgagc agctctgtgg actcaaaggt tttctccctg
61 agaggcatga cccaggccag ctgattcatc agaatcagga tggacgtggt agaggtcgcg
121 ggcagttggt gggcacaaga gcgagaggac atcattatga aatacgaaaa gggacaccga
181 gctgggctgc cagaggacaa ggggcctaag ccttttcgaa gctacaacaa caacgtcgat
241 catttgggga ttgtacatga gacggagctg cctcctctga ctgcgcggga ggcgaagcaa
301 attcggcggg agatcagccg aaagagcaag tgggtggata tgctgggaga ctgggagaaa
361 tacaaaagca gcagaaagct catagatcga gcgtacaagg gaatgcccat gaacatccgg
421 ggcccgatgt ggtcagtcct cctgaacatt gaggaaatga agttgaaaaa ccccggaaga
481 taccagatca tgaaggagaa gggcaagagg tcatctgagc acatccagcg catcgaccgg
541 gacataagcg ggacattaag gaagcatatg ttcttcaggg atttcacagc ccaaatggcg
601 ggaccgtcca ggggctccaa gaccaacagg agcatgtggt agccacgtca caacccaaga
661 ccatggggca tcaggacaag aaagatctat gtgggcagtg ttccccgtta ggctgcctca
721 tccggatatt gattgacggg atctctctcg ggctcaccct gcgcctgtgg gacgtgtatc
781 tggtagaagg cgaacaggcg ttgatgccga taacaagaat cgcctttaag gttcagcaga
841 agcgcctcac gaagacgtcc aggtgtggcc cgtgggcacg tttttgcaac cggttcgttg
901 atacctgggc cagggatgag gacactgtgc tcaagcatct tagggcctct atgaagaaac
961 taacaagaaa gcagggggac ctgccacccc cagccaaacc cgagcaaggg tcgtcggcat
1021 ccaggcctgt gccggcttca cgtggcggga agaccctctg caagggggac aggcaggccc
1081 ctccaggccc accagcccgg ttcccgcggc ccatttggtc agcttccccg ccacgggcac
1141 ctcgttcttc cacaccctgt cctggtgggg ctgtccggga agacacctac cctgtgggca
1201 ctcagggtgt gcccagcccg gccctggctc agggaggacc tcagggttcc tggagattcc
1261 tgcagtggaa ctccatgccc cgcctcccaa cggacctgga cgtagagggc ccttggttcc
1321 gccattatga tttcagacag agctgctggg tccgtgccat atcccaggag gaccagctgg
1381 ccccctgctg gcagactgaa caccctgcgg agcgggtgag atcggctttc gctgcaccca
1441 gcactgattc cgaccagggc acccccttca gagctaggga cgaacagcag tgtgctccca
1501 cctcagggcc ttgcctctgc gacctccact tggaaagttc tcagttccct ccaggcttct
1561 agaagcatct gggccagggc tcatggctgg ataatttccc taggcttaac aacccaagca
1621 agcttcgcat cctcgtttta tttttggtta aacttatgaa aatgtattaa gaaagagtgc
1681 agctcgagag agattcagag atggaacaca ccagacccca gatcacaaag ccaaccatgc
1741 ccagcccctc ccagcacccc cagccccacg accatcgttc tgaattctga cgacaccgtg
1801 agcctgcctt tgtacttcaa actcatggaa ggataaccac cttcatgttt tgaaataaat
1861 gtttcctgtt gaaatg
//