LOCUS AK301814 1793 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56898 complete cds, highly similar to
CLIP-associating protein 1.
ACCESSION AK301814
VERSION AK301814.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1793)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1793
/clone="TESTI2008194"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496438"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 5..1567
/codon_start=1
/note="highly similar to CLIP-associating protein 1"
/protein_id="BAH13560.1"
/transl_table=1
/translation="MRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLA
VSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL
KNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEI
YSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEG
GRTALDNKTSLLNTQPPRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLR
DVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLL
ETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEA
ASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPG
LLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNS
NSSSSSDVSTHS"
BASE COUNT 502 a 478 c 431 g 382 t
ORIGIN
1 tttgatgaga tttattgtgg atcaaactca aactccaaac ctcaaggtca aagttgcaat
61 cctgaaatac attgagtctc tggccagaca gatggatcca acagattttg taaactctag
121 tgagacaagg cttgctgttt ctagaatcat aacctggaca acagaaccaa agagttcaga
181 cgtgagaaag gcagcacaga ttgtgctaat ctctctgttt gaattgaata ctcctgaatt
241 taccatgtta cttggtgcct tgccaaaaac attccaggat ggtgccacca aactcctgca
301 caaccacctc aagaattcca gtaacaccag tgtgggctct ccaagcaata cgattggccg
361 gacgccctcc cgacacacca gcagcaggac cagccccctg acctcaccca ccaactgttc
421 ccatgggggt ctgtctccaa gcatgctgga ctatgataca gagaacctga actctgaaga
481 aatctatagt tctctacgtg gagttacaga agccattgaa aagtttagtt ttcgaagcca
541 agaagatctg aatgagccaa ttaaacgaga tggcaaaaag gagtgtgata ttgtgtcccg
601 cgatgggggc gctgcctccc ctgccactga gggccggggg ggtagtgaag tagaaggagg
661 ccggacagct ctggataaca agacctcact actcaacacc cagcctccgc gcgccttccc
721 ggggccgcgg gcgcgagact acaacccgta cccctactca gatgccatca acacctacga
781 caagaccgcc ctgaaagagg ctgtgttcga tgacgacatg gagcagcttc gagacgtgcc
841 catcgaccat tctgacctgg tggctgacct tctgaaagag ctgtccaacc acaatgagcg
901 agtggaggaa cggaagggag ccctgctgga gctgctcaag atcacgcggg aagacagcct
961 tggtgtctgg gaggagcact tcaagaccat tctgctcctg ctgctggaga cccttggaga
1021 caaagaccat tcaattcgag cactggcgtt aagagttttg agggaaattc tgagaaatca
1081 accagcaaga tttaaaaact acgccgagct gacgattatg aagactctgg aagcccacaa
1141 agactcccat aaggaggtgg tgagagcggc tgaggaggct gcgtccacac tggccagttc
1201 catccacccg gagcagtgca tcaaggtgct ctgccccatc atccagacgg ccgactaccc
1261 catcaacctt gctgccatca agatgcagac caaagtcgtc gagaggatcg caaaggagtc
1321 attgctgcag ctccttgtcg acatcatccc aggcttgctg cagggttatg acaacaccga
1381 aagtagtgtg cgtaaggcca gcgtgttttg cttagtggca atttattccg taatcggaga
1441 agacctgaaa cctcaccttg cacagctcac agggagcaag atgaagctac taaacttata
1501 cataaagagg gcccagacca ccaacagcaa cagcagctcc tcctccgatg tctccacgca
1561 cagctaatgg cagtacctgt ctcttgtgta gacctagaag caatcggtgg tgcctctcag
1621 agacctttcc ccaccccctt catcggctgc ccagtcagta caaggaggcc cacaaatatt
1681 tattacaatc agtattttgg tcccttccag cttttctgta gaatcttact ggtattgaat
1741 gtaaaggaag caaggcctgt attgcagtct tcatacaaaa caaaaggaat aag
//