LOCUS AK301778 1800 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55797 complete cds, highly similar to Homo
sapiens t-complex 11(TCP11), mRNA.
ACCESSION AK301778
VERSION AK301778.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1800)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1800
/clone="TESTI2006197"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496402"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 73..1608
/codon_start=1
/note="highly similar to Homo sapiens t-complex
11(TCP11), mRNA"
/protein_id="BAH13551.1"
/transl_table=1
/translation="MTRGGGGGDTISKMPDVKESVPPKYPGDSEGRSCKPETSGPPQE
DKSGSEDPPPCLTETVNEVSKLSNKIGMNCDYYMEEKVLPPSSLEGKVKETVHNAFWD
HLKEQLSATPPDFSCALELLKEIKEILLSLLLPRQNRLRIEIEEALDMDLLKQEAEHG
ALKVLYLSKYVLNMMALLCAPVRDEAVQKLENITDPVWLLRGIFQVLGRMKMDMVNYT
IQSLQPHLQEHSIQYERAKFQELLNKQPSLLNHTTKWLTQAAGDLTMSPPTCPDTSDS
SSVAGPSPNEAANNPEPLSPTMVLCQGFLNLLLWDLENEEFPETLLMDRTRLQELKSQ
LHQLTVMASVLLVASSFSGSVLFGSPQFVDKLKRITKSLLEDFHSRPEEAILTVSEQV
SQEIHQSLKNMGLVALSSDNTASLMGQLQNIAKKENCVCSVIDQRIHLFLKCCLVLGV
QRSLLDLPGGLTLIEAELAELGQKFVNLTHHNQQVFGPYYTEILKTLISPAQALETKV
ESV"
BASE COUNT 480 a 492 c 431 g 397 t
ORIGIN
1 gacgccccaa cccgccgctc cgccgcggtg gtacgctcca ggccgcgagg cccaccgagc
61 ggacgccagt ggatgacccg cggcggggga ggaggagata ccatcagcaa aatgccagac
121 gtcaaggaga gtgtgccccc gaaatatcct ggcgactcag agggcaggtc ctgtaagccc
181 gaaacctcag gaccccccca ggaagacaag agcggctccg aggacccccc tccctgtctg
241 acagaaaccg ttaatgaagt ttccaagctg agcaacaaga ttgggatgaa ttgtgattac
301 tacatggaag agaaggtttt acctccaagc agtctggaag gcaaggtcaa ggagacagtg
361 cacaatgcct tttgggacca tcttaaagag caactatcag caactccccc tgacttcagc
421 tgtgctcttg aacttctgaa agaaattaaa gagatcttgc tatcactgct attaccacgc
481 cagaaccgcc tgagaattga gattgaagaa gctctggaca tggacttgct caagcaggag
541 gcagaacatg gggccctgaa agtcctctat ctctctaagt acgttctcaa catgatggct
601 ttgctgtgtg caccagttcg agatgaagca gtgcagaaac tagaaaacat tacggatcct
661 gtttggctac tgagagggat cttccaggtt ctgggccgga tgaaaatgga catggtgaac
721 tacactatcc agagccttca accccacctg caggaacatt ccattcagta tgaacgggct
781 aaattccagg aactcctcaa taagcagcct agtctcctta atcacaccac caaatggctg
841 acccaagcag caggagacct caccatgtca cctccgactt gcccagacac ttctgactcc
901 tccagtgtgg ctggcccctc tcccaatgag gcagccaaca acccagagcc cctcagcccc
961 acaatggtgc tgtgtcaggg cttcttgaac ctccttctct gggaccttga aaatgaagag
1021 ttccctgaga ccctgctgat ggacagaacc cggctgcagg agctgaagtc ccagttgcac
1081 cagttaaccg tcatggcctc agtcttgctg gtggccagta gtttctccgg cagtgttttg
1141 tttggctcac cccaatttgt agataaactg aaacgcataa ccaaatcctt gttggaagac
1201 tttcactcca ggcctgagga agctatactg actgtgagtg aacaggtatc tcaggaaatc
1261 catcaaagcc tcaagaatat gggccttgtt gctctaagca gtgataatac agcatctcta
1321 atgggacagc tccagaacat tgccaagaag gagaactgtg tctgcagtgt tattgatcag
1381 cggatccatt tgtttctcaa atgctgtttg gttcttggtg tgcagcggtc tctattagac
1441 cttcctggag gccttactct cattgaagca gaactggcag aactgggcca aaagtttgtc
1501 aacttgacac atcacaatca gcaggtgttt ggtccctact acactgagat cctaaaaacc
1561 ctcatttccc cagcccaggc actggaaaca aaagtggagt ctgtttgata gcgtcggctc
1621 agagccctgg taccttggac ccaagaggag gcccatcatc ttcctggagt aacatcacca
1681 gtgaccagca gacagtgagc ttctatccca ggccctgcag ccagtacacc aaggctgtag
1741 ggatcaagca tgtaaacacc aactggtcca tacccattca ttaataaact tcttaagtgc
//