LOCUS AK301765 952 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52266 complete cds, weakly similar to
Fascin-3.
ACCESSION AK301765
VERSION AK301765.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 952)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..952
/clone="TESTI2005461"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496389"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 124..549
/codon_start=1
/note="weakly similar to Fascin-3"
/protein_id="BAG63225.1"
/transl_table=1
/translation="MDETEWIHRHPKAEDLRVGLISWAGTYLTFEACKNTVTATAKSL
GRRQHRVVVSERREVESTGWLCQKEEKWRAQVGKQNCGHPGEVGPVELLQSLCFCSGC
GLRMGNSRSPSSVGLHSREECRHLWDGCQTEAGAKFFLL"
BASE COUNT 229 a 211 c 301 g 211 t
ORIGIN
1 aagttctctc tgggaacatc tggtgggtac tacaggccct attccaggcc ctatggcctg
61 tggaacctca ccacgggggg gagggctggg ccagacggag acatcacctg tggtgtcagc
121 cccatggatg agacagagtg gatacacaga catcccaagg ctgaggacct aagggttggg
181 ctcatcagct gggcaggaac ctacctcacc tttgaggcat gcaagaatac agtcactgca
241 actgcgaaga gtttgggcag gagacagcac agggtggttg tgtcagaaag aagagaagtg
301 gagagcacag ggtggttgtg tcagaaagag gagaagtgga gagcccaggt gggaaagcag
361 aattgtgggc atccagggga agttggacca gtggagttat tgcaaagcct atgtttctgt
421 tctggttgtg gtttgagaat ggggaactcc agaagcccta gcagtgtcgg tcttcattct
481 agagaggaat gtaggcacct ctgggatggg tgccagactg aggcaggggc aaagttcttc
541 ctcttataac aaggttgatc acagctgaac caggcagttg catctgaact gttcatgctc
601 ccatcttcat ccctggagcc agggcctgcc tataagagct tttgcttctg tcttgccatg
661 ctggaaggca acctttgggg atggaggtat tggctaagtg tgctctctgc ggacaacagt
721 gaggaagaaa aaaacctggg agatcttggt gagcaatgag catgagacac aggccgtggt
781 gcgactaaag agcgtgcagg gcctctacct gctgtgtgag tgtgatggca ccgtgtgtta
841 tggccgccca aggaccagcc accatgggtg ctttctactg cgtttccacc ggaacagcaa
901 gtggaccctc cagtgcctaa tctctggtcg ttatttggag tccaatggca ag
//