LOCUS AK301763 1558 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57643 complete cds, highly similar to Homo
sapiens cancer susceptibility candidate 1 (CASC1), mRNA.
ACCESSION AK301763
VERSION AK301763.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1558)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1558
/clone="TESTI2005335"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496387"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 224..1534
/codon_start=1
/note="highly similar to Homo sapiens cancer
susceptibility candidate 1 (CASC1), mRNA"
/protein_id="BAG63223.1"
/transl_table=1
/translation="MERLEIQRIEKEKWHRLEAKDLERRNEELEELYLLERCFPEAEK
LKQETKLLSQWKHYIQCDGSPDPSVAQEMNTFISLWKEYTSAVTELVKDDVKNVEKAI
SKEVEEESKQQERGSHLIQEEEIKVEEEQGDIEVKMSSAEEESEAIKCEREMKVLSET
VSAAQLLLVENSSEKPDFFEDNVVDLCQFTTLGGVYHLDILELPPQCKPVKGWMIVEI
LKEGLQKYTYPPETTEEFETENAFPPIEVTLEVHENVIFFEDPVVVRWDAEGKHWRTD
GISNVSYKPKERLVTFSLDTFGPVTLIQDAHINMPYQSWELRPLDVNKVLLTVTTVFT
EIQIQIKENLCMLSSIKLKDKKHISILEGTWMTPIPFIIALKEAGLNIFPTRHSHFYV
IINNKVPLVEVKAYRQMALLSSAFAFGWSKWNLLCNSTKVVFKW"
BASE COUNT 554 a 250 c 351 g 403 t
ORIGIN
1 caatttctgc tccgactctg cggactactg cagtggagct tgactcttaa tgggtcccaa
61 agcaaaaaag tctggcagta agaaaaagaa agtcaccaaa gctgaacgat tgaagctgct
121 acaagaggag gaggagagac gactgaaaga ggaaggtaca aaataaatag tgatactatt
181 tacctataca gaggaagcca gtttgaaata tgagaaagaa gaaatggaaa ggcttgaaat
241 acagcgaatt gagaaagaaa aatggcatcg acttgaagca aaagatctag aaaggagaaa
301 tgaagaactt gaagaacttt atttattaga gaggtgtttt cctgaagcag agaaattgaa
361 acaggaaact aaattgcttt ctcagtggaa gcactacatt caatgtgatg ggagtcctga
421 tccttcagta gcccaagaaa tgaacacgtt tattagtttg tggaaagaat acacttctgc
481 agtaactgag cttgtcaaag atgatgttaa gaatgtagaa aaagcaatca gcaaggaggt
541 cgaagaagag tccaaacaac aagaaagagg gtctcactta attcaggagg aagaaataaa
601 agttgaggag gaacaaggtg atattgaagt gaaaatgagt tctgctgagg aagaatctga
661 agccataaaa tgtgaacgag agatgaaagt attaagtgaa actgtttcag cagcacagtt
721 gttgctggta gagaattctt ctgaaaagcc agatttcttt gaagacaatg tggtggattt
781 atgccagttc acaactctgg gtggagtata ccacttggat attttggagc ttcctccaca
841 gtgtaaacca gtgaagggat ggatgattgt ggaaatactc aaagaaggat tacagaaata
901 cacatatcct ccggaaacta cagaagagtt tgagacagaa aatgctttcc cacctataga
961 ggtcacactt gaggttcatg agaatgtaat cttttttgag gatcctgtgg ttgtaaggtg
1021 ggatgctgaa ggtaaacatt ggagaactga tggcatcagc aatgtatcct acaaaccaaa
1081 agaaagactt gtaacattca gcctggacac ctttggccct gttaccttga ttcaagatgc
1141 tcatattaac atgccgtacc agtcatggga actaagacca cttgatgtaa ataaagtact
1201 tttaactgtg actacagtat ttactgagat tcaaatacaa attaaggaaa acctctgcat
1261 gttatcttca atcaaactaa aagacaagaa acacatctct attttggaag gaacctggat
1321 gactcctatt cctttcatta ttgctttgaa agaagctgga ctgaatatct ttcctactag
1381 acactctcat ttttatgtta ttataaacaa taaggttcct ttggtagaag tgaaagctta
1441 tcgacagatg gccctactaa gttctgcttt tgcatttggt tggagcaagt ggaacctact
1501 atgtaattct acaaaagtcg tatttaagtg gtgacagagc acaaagactg aagatcaa
//