LOCUS AK301756 1949 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ55948 complete cds, highly similar to HECT domain and RCC1-like domain-containing protein 5. ACCESSION AK301756 VERSION AK301756.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1949) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1949 /clone="TESTI2004787" /clone_lib="TESTI2" /db_xref="H-InvDB:HIT000496380" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="testis" CDS 216..1505 /codon_start=1 /note="highly similar to HECT domain and RCC1-like domain-containing protein 5" /protein_id="BAG63217.1" /transl_table=1 /translation="MHISNNWESLVVPFAKVVCKMSDQSSLVLEEYWATLQESTFSKL VQMFKTAVICQLDYWDESAEENGNVQALLEMLKKLHRVNQVKCQLPESIFQVDELLHR LNFFVEVCRRYLWKMTVDASENVQCCVIFSHFPFIFNNLSKIKLLHTDTLLKIESKKH KAYLRSAAIEEERESEFALRPTFDLTVRRNHLIEDVLNQLSQFENEDLRKELWVSFSG EIGYDLGGVKKEFFYCLFAEMIQPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFGVLC GLSLFNCNVANLPFPLALFKKLLDQMPSLEDLKELSPDLGKNLQTLLDDEGDNFEEVF YIHFNVHWDRNDTNLIPNGSSITVNQTNKRDYVSKYINYIFNDSVKAVYEEFRRGFYK MCDEDIIKLFHPEELKDVIVGNTDYDWKTFEKVHHQV" BASE COUNT 591 a 352 c 396 g 610 t ORIGIN 1 actgctatct ttaggttttc tttttgcagg tgctccaaac atgcttcctt tatttttatt 61 tttatttttt tggaaacgga gtctcgcttt gttgcccagg ctggagtcca gtgataacca 121 cctgcctcaa agataatctg ctcaaaagac ttccatttca ttctccaccc caagaagctt 181 tagaaatttt cttccttctc ccagaatgtc ctgtgatgca tatttccaac aactgggaga 241 gccttgtggt tccatttgca aaggttgttt gtaaaatgag tgaccagtct tcactggttc 301 tggaagagta ttgggcaact ctgcaagaat ccactttcag caaactggtc cagatgttta 361 aaacagccgt catatgccag ttggattact gggatgaaag tgctgaggag aatggtaatg 421 ttcaagctct cctagaaatg ttgaagaagc tgcacagggt aaaccaggtg aaatgtcaac 481 tacctgaaag tattttccaa gtagacgaac tcttgcaccg tctcaatttt tttgtagaag 541 tatgcagaag gtacttgtgg aaaatgactg tggacgcttc agaaaatgta caatgctgcg 601 tcatattcag tcactttcca tttatcttta ataatctgtc gaaaattaaa ctactacata 661 cagacacact tttaaaaata gagagtaaaa aacataaagc ttatcttagg tcggcagcaa 721 ttgaggaaga aagagagtct gaattcgctt tgaggcccac gtttgatcta acagtcagaa 781 ggaatcactt gattgaggat gttttgaatc agctaagtca atttgagaat gaagacctga 841 ggaaagagtt atgggtttca tttagtggag aaattgggta tgacctcgga ggagtcaaga 901 aagagttctt ctactgtctg tttgcagaga tgatccagcc ggaatatggg atgttcatgt 961 atcctgaagg ggcttcctgc atgtggtttc ctgtcaagcc taaatttgag aagaaaagat 1021 acttcttttt tggggttcta tgtggacttt ccctgttcaa ttgcaatgtt gccaacctcc 1081 ctttcccact ggcactgttt aagaaacttt tggaccaaat gccatcattg gaagacttga 1141 aagaactcag tcctgatttg ggaaagaatt tgcaaacact tctggatgat gaaggtgata 1201 actttgagga agtattttac atccatttta atgtgcactg ggacagaaac gacacaaact 1261 taattcctaa tggaagtagc ataactgtca accagactaa caagagagac tatgtttcta 1321 agtatatcaa ttacattttc aacgactctg taaaggcggt ttatgaagaa tttcggagag 1381 gattttataa aatgtgcgac gaagacatta tcaaattatt ccaccccgaa gaactgaagg 1441 atgtgattgt tggaaataca gattatgatt ggaaaacatt tgaaaaggta catcatcaag 1501 tctaagttga ttaaattcag ttttccttcc tatttcctca ataacttttt tttgtatttt 1561 ctctagaatg cacgttatga accaggatat aacagttcac atcccaccat agtgatgttt 1621 tggaaggctt tccacaaatt gactctggaa gaaaagaaaa aattccttgt atttcttaca 1681 ggaactgaca gactacaaat gaaagattta aataatatga aaataacatt ttgctgtcct 1741 gaaagttgga atgaaagaga ccctataaga gcactgacat gtttcagtgt cctcttcctc 1801 cctaaatatt ctacaatgga aacagttgaa gaagcgcttc aagaagccat caacaacaac 1861 agaggatttg gctgaccagc ttgcttgtcc aacagcctta ttttgttgtt gttatcgttg 1921 ttgttgttgt tgttgttgtt gtttctcta //