LOCUS AK301710 1795 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60188 complete cds, highly similar to Homo
sapiens spermatogenesis and centriole associated 1 (SPATC1), mRNA.
ACCESSION AK301710
VERSION AK301710.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1795)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1795
/clone="TESTI2000403"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496334"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 91..1416
/codon_start=1
/note="highly similar to Homo sapiens spermatogenesis and
centriole associated 1 (SPATC1), mRNA"
/protein_id="BAG63181.1"
/transl_table=1
/translation="MSLLTNYEGLRHQIERLVRENEELKKLVRLIRENHELKSAIKTQ
AGGLGISGFTSGLGEATAGLSSRQNNGVFLPPSPAVANERVLEEVGIMALAPLAEMLT
SLQPSATPGSLMSPLTGTLSTLLSGPAPTSQSSPLTSFLTSPIAGPLTGTLASSLGLP
STGTLTPSSLVAGPVAMSQSSPLIAPVMGTVAVSLSSPLLSSTATPPGVSQNLLANPM
SNLVLPEAPRLRLAEPLRGGPTGPQSPACVVPTATTKVPLSTEPPQSTQDPEPLSMAF
AGAPLQTSTPIGAMGTPAPKTAFSFNTSDTQAQPSAAQEQVVPASVPTSPTTSPTVTV
LASAPALAPQVATSYTPSSTTHIAQGAPHPPSRMHNSPTQNLPVPHCPPHNAHSPPRT
SSSPASVNDSRGPRTTEPSTKSMMEVERKLAHRKTSKFPENPRGFPEPQ"
BASE COUNT 344 a 693 c 468 g 290 t
ORIGIN
1 ctccttcagc ccaggcaagg cctggggccc tgggcagcct ccaggtgcag tgccctcccg
61 tgggccgcac ccttgccact gccccagggc atgtctctac tcaccaatta tgaagggctt
121 cggcatcaga tagagaggct ggtgcgggaa aatgaggaac tgaagaagtt ggtgcggctc
181 attcgggaga atcacgagct caagtcagcg atcaagactc aggcaggcgg gctcggcatc
241 agcgggttca cgagtgggct tggtgaggca acagcaggcc tttcctcacg ccagaacaat
301 ggtgtcttcc tgcccccgtc cccagcagtg gcaaacgaac gagtcctcga ggaagtgggg
361 atcatggcct tggcacccct ggccgagatg ctaaccagct tgcagcccag cgccacaccg
421 ggctcactca tgagccccct gacaggcacc ctcagcacgc tgctgtctgg cccagcaccc
481 acgtcacaga gcagccccct caccagcttc ctgaccagtc ccattgcggg acccctaaca
541 ggcacactgg ccagttccct gggcctgccc tccactggca ccctgactcc cagcagcctc
601 gtggcaggcc ctgtggccat gtcccagagc agccccctga tagcccctgt gatgggcacg
661 gtggctgtct ctctgagcag ccccctcctc agctccactg ccaccccacc aggggtctct
721 cagaacctgc tggccaaccc catgagcaac ctggtcctgc cagaggcccc aaggctgcgg
781 ctggctgagc cactccgcgg aggccccact gggccccagt ccccagcttg cgtggtaccc
841 actgccacca ccaaagtccc actctccact gagccccccc agtcgaccca ggacccagag
901 cctctcagca tggcgtttgc aggagcaccc ctccagacct ccacccctat cggagccatg
961 ggcacacctg ctcccaagac ggccttctcc ttcaacactt cggacacaca ggcccagccc
1021 agtgccgccc aggaacaagt ggtccctgca tctgtcccca cctcccccac cacctccccc
1081 acggtcaccg tccttgcctc tgcccccgcc cttgcccccc aggttgccac cagctacaca
1141 ccctcaagca ccacccacat cgcccagggt gccccccatc ccccttcccg aatgcataat
1201 tccccaaccc agaacctgcc tgtcccccac tgtcctccac acaacgccca ctccccacct
1261 cgtacctcat cctccccggc ttcagtcaat gactctcgag gtccacgcac cacagaaccg
1321 tcgacgaaga gcatgatgga ggtggaacgg aagctggccc accgcaagac cagcaagttc
1381 cccgagaacc cccgaggctt ccctgaaccc cagtgaccac aagctggatg agaagctgtg
1441 ccagaggctc acacagcgct atgtgagcgt catgaacagg ctgcagagtc tgggctacaa
1501 cgggcgggtg caccctgcgc tgaccgagca gctggtgaac gcttatggca tcctgcgaga
1561 gcgcccggag ctggcggcgt ctgagggcgg cccctacacc gtggacttcc tgcagcgtgt
1621 ggtggtggag accgtgcacc ccggcatgct cgccgacgcg ctgctgctgc tctcctgcct
1681 cagccagctg gcgcacgatg acggcaagcc catgttcatc tggtgacgct ggagctggga
1741 ggtccaggct cgctcagccc cacagccctg tgcacggcca ttaaagcttc ccaca
//