LOCUS AK301693 1207 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54820 complete cds, highly similar to
Ly6/PLAUR domain-containing protein 5 precursor.
ACCESSION AK301693
VERSION AK301693.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1207)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1207
/clone="TESOP2008826"
/clone_lib="TESOP2"
/db_xref="H-InvDB:HIT000496317"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="esophagus, tumor tissue"
CDS 82..837
/codon_start=1
/note="highly similar to Ly6/PLAUR domain-containing
protein 5 precursor"
/protein_id="BAG63165.1"
/transl_table=1
/translation="MAMGVPRVILLCLFGAALCLTGSQALQCYSFEHTYFGPFDLRAM
KLPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNPDALPPDYSVVRG
CTTDKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQ
TACFQGNGRMTVGNFSVPVYIRTCHRPSCTTEGTTSPWTAIDLQGSCCEGYLCNRKSM
TQPFTSASATTPPRALQVLALLLPVLLLVGLSA"
BASE COUNT 249 a 421 c 308 g 229 t
ORIGIN
1 gatgcttagg actcagtaag gagaaccagc caggcagcac atcacagcgg gaggagctgt
61 cccaggtggc ccagctcagc aatggcaatg ggggtcccca gagtcattct gctctgcctc
121 tttggggctg cgctctgcct gacagggtcc caagccctgc agtgctacag ctttgagcac
181 acctactttg gcccctttga cctcagggcc atgaagctgc ccagcatctc ctgtcctcat
241 gagtgctttg aggctatcct gtctctggac accgggtatc gcgcgccggt gaccctggtg
301 cggaagggct gctggaccgg gcctcctgcg ggccagacgc aatcgaaccc ggacgcgctg
361 ccgccagact actcggtggt gcgcggctgc acaactgaca aatgcaacgc ccacctcatg
421 actcatgacg ccctccccaa cctgagccaa gcacccgacc cgccgacgct cagcggcgcc
481 gagtgctacg cctgtatcgg ggtccaccag gatgactgcg ctatcggcag gtcccgacga
541 gtccagtgtc accaggacca gaccgcctgc ttccagggca atggcagaat gacagttggc
601 aatttctcag tccctgtgta catcagaacc tgccaccggc cctcctgcac caccgagggc
661 accaccagcc cctggacagc catcgacctc cagggctcct gctgtgaggg gtacctctgc
721 aacaggaaat ccatgaccca gcccttcacc agtgcttcag ccaccacccc tccccgagca
781 ctacaggtcc tggccctgct cctcccagtc ctcctgctgg tggggctctc agcatagacc
841 gcccctccag gatgctgggg acagggctca cacacctcat tcttgctgct tcagccccta
901 tcacatagct cactggaaaa tgatgttaaa gtaagaattg cactcctgtc cctctggcct
961 tccatctctc ccgcccttgt gccccacaac ctggccaaca gtactggaag aaactggaca
1021 cagtcaccag catcccaggg gagggcaaaa cagccatgtc gtgccctgat gaagagcaat
1081 tctgatcaca gctgttactc actgagcacc agccaggcac caggcacccc ataacacggc
1141 ttcctgtgct ctccctccag agcctgtcgc agctctagga gggagctata caatgatgtc
1201 tttatta
//