LOCUS AK301686 1918 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51361 complete cds, highly similar to
Keratin, type II cytoskeletal 6A.
ACCESSION AK301686
VERSION AK301686.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1918)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1918
/clone="TESOP2007198"
/clone_lib="TESOP2"
/db_xref="H-InvDB:HIT000496310"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="esophagus, tumor tissue"
CDS 69..1631
/codon_start=1
/note="highly similar to Keratin, type II cytoskeletal 6A"
/protein_id="BAG63158.1"
/transl_table=1
/translation="MASTSTTIRSHSGSRSLYGLGGSKRISIGGGSCAISGGYGSRAG
GSYGFGGAGSGFGFGGGAGIGFGLGGGAGLAGGFGGPGFPVCPPGGIQEVTVNQSLLT
PLNLQIDPTIQRVRAEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWTLLQEQGTK
TVRQNLEPLFEQYINNLRRQLDSIVGERGRLDSELRGMQDLVEDFKNKYEDEINKRTA
AENEFVTLKKDVDAAYMNKVELQAKADTLTDEINFLRALYDAELSQMQTHISDTSVVL
SMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQTKYEELQVTAGRHGDDLRNTK
QEIAEINRMIQRLRSEIDHVKKQCANLQAAIADAEQRGEMALKDAKNKLEGLEDALQK
AKQDLARLLKEYQELMNVKLALDVEIATYRKLLEGEGCRLNGEGVGQVNISVVQSTVS
SGYGGASGVGSGLGLGGGSSYSYGSGLGVGGGFSSSSGRAIGGGLSSVGGGSSTIKYT
TTSSSSRKSYKH"
BASE COUNT 429 a 537 c 561 g 391 t
ORIGIN
1 gtcctgcttc tcttccctct ctcctccagc ctctcacact ctcctcagct ctctcatctc
61 ctggaaccat ggccagcaca tccaccacca tcaggagcca cagtggcagc cgcagtctgt
121 atggcctggg gggctccaag aggatctcca ttggaggggg cagctgtgcc atcagtggcg
181 gctatggcag cagagccgga ggcagctatg gctttggtgg cgccgggagt ggatttggtt
241 tcggtggtgg agccggcatt ggctttggtc tgggtggtgg agccggcctt gctggtggct
301 ttgggggccc tggcttccct gtgtgccccc ctggaggcat ccaagaggtc accgtcaacc
361 agagtctcct gactcccctc aacctgcaaa tcgatcccac catccagcgg gtgcgggccg
421 aggagcgtga gcagatcaag accctcaaca acaagtttgc ctccttcatc gacaaggtgc
481 ggttcctgga gcagcagaac aaggttctgg aaacaaagtg gaccctgctg caggagcagg
541 gcaccaagac tgtgaggcag aacctggagc cgttgttcga gcagtacatc aacaacctca
601 ggaggcagct ggacagcatt gtcggggaac ggggccgcct ggactcagag ctcagaggca
661 tgcaggacct ggtggaggac ttcaagaaca aatatgagga tgaaatcaac aagcgcacag
721 cagcagagaa tgaatttgtg actctgaaga aggatgtgga tgctgcctac atgaacaagg
781 ttgaactgca agccaaggca gacactctca cagacgagat caacttcctg agagccttgt
841 atgatgcaga gctgtcccag atgcagaccc acatctcaga cacatctgtg gtgctgtcca
901 tggacaacaa ccgcaacctg gacctggaca gcatcatcgc tgaggtcaag gcccaatatg
961 aggagattgc tcagagaagc cgggctgagg ctgagtcctg gtaccagacc aagtacgagg
1021 agctgcaggt cacagcaggc agacatgggg acgacctgcg caacaccaag caggagattg
1081 ctgagatcaa ccgcatgatc cagaggctga gatctgagat cgaccacgtc aagaagcagt
1141 gcgccaacct gcaggccgcc attgctgatg ctgagcagcg tggggagatg gccctcaagg
1201 atgccaagaa caagctggaa gggctggagg atgccctgca gaaggccaag caggacctgg
1261 cccggctgct gaaggagtac caggagctga tgaatgtcaa gctggccctg gacgtggaga
1321 tcgccaccta ccgcaagctg ctggagggtg aggggtgcag gctgaatggc gaaggcgttg
1381 gacaagtcaa catctctgtg gtgcagtcca ccgtctccag tggctatggc ggtgccagtg
1441 gtgtcggcag tggcttaggc ctgggtggag gaagcagcta ctcctatggc agtggtcttg
1501 gcgttggagg tggcttcagt tccagcagtg gcagagccat tgggggtggc ctcagctctg
1561 ttggaggcgg cagttccacc atcaagtaca ccaccacctc ctcctccagc aggaagagct
1621 ataagcacta aagtgcgtct gctagctctc agtcccacag tcctcaggcc cctctctggc
1681 tgcagagccc tctcctcagg ttgcctgtcc tctcctggcc tccagtctcc cctgctgtcc
1741 caggtagagc tggggatgaa tgcttagtgc cctcacttct tctctctctc tctataccat
1801 ctgagcaccc attgctcacc atcagatcaa cctctgattt tacatcatga tgtaatcacc
1861 actggagctt cactgttact aaattattaa tttcttgcct ccagtgttct atctctga
//